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Query: NC_006576:2328427 Synechococcus elongatus PCC 6301, complete genome

Start: 2328427, End: 2355062, Length: 26636

Host Lineage: Synechococcus elongatus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: Freshwater organism. These unicellular cyanobacteria are also known as blue green algae and along with Prochlorococcus are responsible for a large part of the carbon fixation that occurs in marine environments. Synechococcus have a broader distribution in the ocean and are less abundant in oligotrophic (low nutrient) regions. These organism utilize photosystem I and II to capture light energy. They are highly adapted to marine environments and some strains have evolved unique motility systems in order to propel themselves towards areas that contain nitrogenous compounds. An obligate photoautotroph, it has been studied extensively by an international research community with respect to acquisition of organic carbon, transport and regulation of nitrogen compounds, adaptation to nutrient stresses, and reponse to light intensity.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_007604:19677701967770199346325694Synechococcus elongatus PCC 7942, complete genome041060BLASTN svgBLASTP svg
NC_007513:1126914*1126914115240425491Synechococcus sp. CC9902, complete genome9e-1693.7BLASTN svgBLASTP svg
NC_009925:42711404271140429472823589Acaryochloris marina MBIC11017, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_008319:1167213*1167213119083423622Synechococcus sp. CC9311, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_007775:27020452702045272109919055Synechococcus sp. JA-3-3Ab, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_007604:14425001442500146357121072Synechococcus elongatus PCC 7942, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_013851:1866523*1866523188892822406Allochromatium vinosum DSM 180 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_011884:83190583190585773325829Cyanothece sp. PCC 7425, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008767:20101402010140202919319054Neisseria meningitidis FAM18, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_010120:19994219994222285022909Neisseria meningitidis 053442, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_010475:11610001161000118709026091Synechococcus sp. PCC 7002, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_014752:2087998*2087998211535127354Neisseria lactamica ST-640, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_019940:2931500*2931500296263931140Thioflavicoccus mobilis 8321 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013854:2714033*2714033273463520603Azospirillum sp. B510, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_019673:7951493*7951493797009918607Saccharothrix espanaensis DSM 44229 complete genome8e-0763.9BLASTN svgBLASTP svg
NC_008391:111217*11121714116329947Burkholderia cepacia AMMD chromosome 2, complete sequence8e-0763.9BLASTN svgBLASTP svg
NC_015556:11885001188500122602637527Pseudomonas fulva 12-X chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg