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Query: NC_006576:217697 Synechococcus elongatus PCC 6301, complete genome

Start: 217697, End: 240781, Length: 23085

Host Lineage: Synechococcus elongatus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: Freshwater organism. These unicellular cyanobacteria are also known as blue green algae and along with Prochlorococcus are responsible for a large part of the carbon fixation that occurs in marine environments. Synechococcus have a broader distribution in the ocean and are less abundant in oligotrophic (low nutrient) regions. These organism utilize photosystem I and II to capture light energy. They are highly adapted to marine environments and some strains have evolved unique motility systems in order to propel themselves towards areas that contain nitrogenous compounds. An obligate photoautotroph, it has been studied extensively by an international research community with respect to acquisition of organic carbon, transport and regulation of nitrogen compounds, adaptation to nutrient stresses, and reponse to light intensity.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_007604:1383192*1383192140158818397Synechococcus elongatus PCC 7942, complete genome036210BLASTN svgBLASTP svg
NC_011884:38815683881568390709925532Cyanothece sp. PCC 7425, complete genome2e-44188BLASTN svgBLASTP svg
NC_019771:33710003371000339501524016Anabaena cylindrica PCC 7122, complete genome2e-34155BLASTN svgBLASTP svg
NC_003272:1862487*1862487188296320477Nostoc sp. PCC 7120, complete genome1e-23119BLASTN svgBLASTP svg
NC_007413:5264463*5264463528667022208Anabaena variabilis ATCC 29413, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_014216:2538500*2538500256387025371Desulfurivibrio alkaliphilus AHT2 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_007435:2352954*2352954238639233439Burkholderia pseudomallei 1710b chromosome II, complete sequence5e-1487.7BLASTN svgBLASTP svg
NC_007650:2429307*2429307246662437318Burkholderia thailandensis E264 chromosome II, complete sequence5e-1487.7BLASTN svgBLASTP svg
NC_009075:587441*58744162177434334Burkholderia pseudomallei 668 chromosome II, complete sequence5e-1487.7BLASTN svgBLASTP svg
NC_009078:510525*51052554399133467Burkholderia pseudomallei 1106a chromosome II, complete sequence5e-1487.7BLASTN svgBLASTP svg
NC_008390:24483792448379247019921821Burkholderia cepacia AMMD chromosome 1, complete sequence1e-1179.8BLASTN svgBLASTP svg
NC_001263:2461941*2461941248301921079Deinococcus radiodurans R1 chromosome 1, complete sequence7e-1073.8BLASTN svgBLASTP svg
NC_013960:2761353*2761353278511923767Nitrosococcus halophilus Nc4 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_021150:3505234*3505234352968724454Azotobacter vinelandii CA6, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014532:29891852989185301261923435Halomonas elongata DSM 2581, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_012560:3505235*3505235352968824454Azotobacter vinelandii DJ, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008312:3638104*3638104366309924996Trichodesmium erythraeum IMS101, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007333:3360000*3360000337759917600Thermobifida fusca YX, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014153:21874092187409221140623998Thiomonas intermedia K12 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014391:42154742154744451422968Micromonospora aurantiaca ATCC 27029 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_007794:2839239*2839239287591536677Novosphingobium aromaticivorans DSM 12444, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015320:273979*27397929615522177Archaeoglobus veneficus SNP6 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014837:38786838786841433626469Pantoea sp. At-9b chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_009142:25655612565561258937023810Saccharopolyspora erythraea NRRL 2338, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_008820:1659612*1659612168715027539Prochlorococcus marinus str. MIT 9303, complete genome7e-0763.9BLASTN svgBLASTP svg