Pre_GI: BLASTN Hits

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Query: NC_006576:1551939 Synechococcus elongatus PCC 6301, complete genome

Start: 1551939, End: 1583753, Length: 31815

Host Lineage: Synechococcus elongatus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: Freshwater organism. These unicellular cyanobacteria are also known as blue green algae and along with Prochlorococcus are responsible for a large part of the carbon fixation that occurs in marine environments. Synechococcus have a broader distribution in the ocean and are less abundant in oligotrophic (low nutrient) regions. These organism utilize photosystem I and II to capture light energy. They are highly adapted to marine environments and some strains have evolved unique motility systems in order to propel themselves towards areas that contain nitrogenous compounds. An obligate photoautotroph, it has been studied extensively by an international research community with respect to acquisition of organic carbon, transport and regulation of nitrogen compounds, adaptation to nutrient stresses, and reponse to light intensity.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_007604:41495414957759936105Synechococcus elongatus PCC 7942, complete genome054010BLASTN svgBLASTP svg
NC_000911:35226335226339172939467Synechocystis sp. PCC 6803, complete genome3e-19105BLASTN svgBLASTP svg
NC_019757:47392064739206476216822963Cylindrospermum stagnale PCC 7417, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_012917:15060831506083154696940887Pectobacterium carotovorum subsp. carotovorum PC1, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_011884:14138311413831143422620396Cyanothece sp. PCC 7425, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_005125:11610001161000119835837359Gloeobacter violaceus PCC 7421, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_013508:1289159*1289159133392244764Edwardsiella tarda EIB202, complete genome7e-1487.7BLASTN svgBLASTP svg
NC_006905:21753612175361220410628746Salmonella enterica subsp. enterica serovar Choleraesuis str3e-1385.7BLASTN svgBLASTP svg
NC_010102:86186086186089518233323Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,3e-1385.7BLASTN svgBLASTP svg
NC_010498:10354061035406106309927694Escherichia coli SMS-3-5, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_011080:21616962161696219837536680Salmonella enterica subsp. enterica serovar Newport str. SL254,3e-1385.7BLASTN svgBLASTP svg
NC_011083:22006132200613223455433942Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,3e-1385.7BLASTN svgBLASTP svg
NC_011149:21108612110861214483233972Salmonella enterica subsp. enterica serovar Agona str. SL483,3e-1385.7BLASTN svgBLASTP svg
NC_003197:21529942152994218696633973Salmonella typhimurium LT2, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_014837:2803447*2803447283151828072Pantoea sp. At-9b chromosome, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_021066:46029246029251915858867Raoultella ornithinolytica B6, complete genome6e-1177.8BLASTN svgBLASTP svg
AC_000091:20966722096672212665729986Escherichia coli W3110 DNA, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_000913:20925592092559212109928541Escherichia coli K12, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_002655:28396002839600287010630507Escherichia coli O157:H7 EDL933, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_002695:27693872769387279989230506Escherichia coli O157:H7 str. Sakai, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_010473:21835672183567221209928533Escherichia coli str. K-12 substr. DH10B, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_011751:23958822395882242503029149Escherichia coli UMN026 chromosome, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_013282:28277572827757286060332847Cronobacter turicensis, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_013421:32794993279499331516735669Pectobacterium wasabiae WPP163, complete genome6e-1177.8BLASTN svgBLASTP svg
CU928145:23244952324495235493330439Escherichia coli 55989 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_003198:21097752109775214492235148Salmonella enterica subsp. enterica serovar Typhi str. CT18,2e-1075.8BLASTN svgBLASTP svg
NC_004631:86200286200289659934598Salmonella enterica subsp. enterica serovar Typhi Ty2, complete2e-1075.8BLASTN svgBLASTP svg
NC_006511:85478585478589509940315Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC2e-1075.8BLASTN svgBLASTP svg
NC_009801:22761312276131230753131401Escherichia coli E24377A, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_011748:23244952324495235493330439Escherichia coli 55989, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_011750:10349191034919106622831310Escherichia coli IAI39 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_020063:16597951659795169109931305Enterobacteriaceae bacterium strain FGI 57, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_007498:10721121072112109809925988Pelobacter carbinolicus DSM 2380, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_007613:86408486408489531131228Shigella boydii Sb227, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_008563:21822702182270221156429295Escherichia coli APEC O1, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_013961:2260250*2260250228983729588Erwinia amylovora, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_014121:33996853399685343519435510Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete1e-0973.8BLASTN svgBLASTP svg
CP002185:22337322233732226508731356Escherichia coli W, complete genome2e-0869.9BLASTN svgBLASTP svg
CP002516:18464921846492187615129660Escherichia coli KO11, complete genome2e-0869.9BLASTN svgBLASTP svg
CU928160:21559472155947218736531419Escherichia coli IAI1 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_009009:1792317*1792317181459922283Streptococcus sanguinis SK36, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_009648:26997392699739273776838030Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_010067:80712980712983359926471Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete2e-0869.9BLASTN svgBLASTP svg
NC_011740:21351412135141215307917939Escherichia fergusonii ATCC 35469, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_000964:41161044116104413604919946Bacillus subtilis subsp. subtilis str. 168, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_010694:15020191502019153332131303Erwinia tasmaniensis, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_014562:20499212049921207971629796Pantoea vagans C9-1 chromosome, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_015061:19022511902251193341231162Rahnella sp. Y9602 chromosome, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_015942:11677851167785119371425930Acidithiobacillus ferrivorans SS3 chromosome, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_004547:16009001600900162975328854Erwinia carotovora subsp. atroseptica SCRI1043, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013411:33454933454935568121133Geobacillus sp. Y412MC61, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014915:23876392387639241026922631Geobacillus sp. Y412MC52 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014976:2117567*2117567214173924173Bacillus subtilis BSn5 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015663:49500004950000501991769918Enterobacter aerogenes KCTC 2190 chromosome, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_007606:19998701999870202709927230Shigella dysenteriae Sd197, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_007946:22318722231872226061428743Escherichia coli UTI89, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_008253:21341102134110216406229953Escherichia coli 536, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_008312:27984632798463282561927157Trichodesmium erythraeum IMS101, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_010468:17750001775000180518230183Escherichia coli ATCC 8739, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_010658:10901041090104112159931496Shigella boydii CDC 3083-94, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_004431:23839012383901241472630826Escherichia coli CFT073, complete genome4e-0661.9BLASTN svgBLASTP svg