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Query: NC_006576:2610565:2610565 Synechococcus elongatus PCC 6301, complete genome

Start: 2610565, End: 2611623, Length: 1059

Host Lineage: Synechococcus elongatus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: Freshwater organism. These unicellular cyanobacteria are also known as blue green algae and along with Prochlorococcus are responsible for a large part of the carbon fixation that occurs in marine environments. Synechococcus have a broader distribution in the ocean and are less abundant in oligotrophic (low nutrient) regions. These organism utilize photosystem I and II to capture light energy. They are highly adapted to marine environments and some strains have evolved unique motility systems in order to propel themselves towards areas that contain nitrogenous compounds. An obligate photoautotroph, it has been studied extensively by an international research community with respect to acquisition of organic carbon, transport and regulation of nitrogen compounds, adaptation to nutrient stresses, and reponse to light intensity.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007516:1810834:1809795180979518108501056Synechococcus sp. CC9605, complete genomephotosystem II D2 protein (photosystem q(a) protein)0666
NC_007577:1047000:1058239105823910593211083Prochlorococcus marinus str. MIT 9312, complete genomephotosystem q(b) protein3e-40166
NC_008817:228029:2361182361182372001083Prochlorococcus marinus str. MIT 9515, complete genomehypothetical protein4e-40165
NC_008817:228029:2341652341652352471083Prochlorococcus marinus str. MIT 9515, complete genomePhotosystem II PsbA protein (D1)4e-40165
NC_009481:764382:7702747702747713501077Synechococcus sp. WH 7803 chromosome, complete genomephotosystem II protein D12e-39163
NC_007335:672847:6821776821776832591083Prochlorococcus marinus str. NATL2A, complete genomePhotosystem II reaction centre protein PsbA/D11e-38160
NC_005125:2811986:2815893281589328169811089Gloeobacter violaceus PCC 7421, complete genomephotosystem II protein D16e-38158
NC_009481:764382:7769117769117779901080Synechococcus sp. WH 7803 chromosome, complete genomephotosystem II protein D13e-34145
NC_007513:1721359:1740750174075017418291080Synechococcus sp. CC9902, complete genomePhotosystem II reaction centre protein PsbA/D17e-33141
NC_007513:1721359:1737282173728217383611080Synechococcus sp. CC9902, complete genomePhotosystem II reaction centre protein PsbA/D17e-33141
NC_018012:2159814:217537021753702176344975Thiocystis violascens DSM 198 chromosome, complete genomephotosynthetic reaction center M subunit6e-0652