Pre_GI: BLASTP Hits

Some Help

Query: NC_006512:2789098:2808892 Idiomarina loihiensis L2TR, complete genome

Start: 2808892, End: 2810400, Length: 1509

Host Lineage: Idiomarina loihiensis; Idiomarina; Idiomarinaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This is the type strain for this organism, which was isolated from a hydrothermal vent at a depth of 1300 m from the Lo'ihi Seamount southeast of Hawaii. This organism grows optimally in salt concentrations of 7.5 to 10%. Genome comparison has suggested that the bacterium has maintained its amino acid transport and degradation systems but lost sugar transport and certain sugar metabolic genes suggesting that it lives on amino acids rather than sugars. This may be in keeping with the environment this organism grows in, which is at hydrothermal deep sea vents that are characterized by collections of proteinaceous particles. This organism may colonize these particles by producing exopolysaccharides.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017328:3935185:3952571395257139540971527Shigella flexneri 2002017 chromosome, complete genomeTransposon Tn7 transposition protein tnsD1e-97357
NC_007384:4095016:4105292410529241068181527Shigella sonnei Ss046, complete genometransposition protein1e-97357
NC_015572:4916430:4929675492967549311711497Methylomonas methanica MC09 chromosome, complete genometransposition protein4e-96352
NC_009052:5089963:5097427509742750989291503Shewanella baltica OS155, complete genometransposition protein1e-88327
NC_015851:89006:1025961025961041221527Acidithiobacillus caldus SM-1 megaplasmid, complete sequencetransposon Tn7 transposition protein TnsD2e-87323
NC_015740:4508375:4515166451516645166681503Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein4e-82305
NC_015497:4564339:4574669457466945762401572Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genometransposon Tn7 transposition protein TnsD1e-78294
NC_010995:4525119:4545561454556145471231563Cellvibrio japonicus Ueda107, complete genomeTn7-Cj, transposition protein TnsD1e-66254
NC_007645:7136956:7186875718687571884071533Hahella chejuensis KCTC 2396, complete genomeTn7-like transposition protein D3e-62239
NC_007498:3399478:3411850341185034133971548Pelobacter carbinolicus DSM 2380, complete genomehypothetical protein5e-60232
NC_011206:123791:1334731334731350741602Acidithiobacillus ferrooxidans ATCC 53993, complete genomehypothetical protein2e-41170
NC_014394:1325616:1325616132561613273611746Gallionella capsiferriformans ES-2 chromosome, complete genomeTn5468, transposition protein D9e-32138
NC_015958:2174731:2180905218090521827911887Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeTn7-like transposition protein D1e-30134
NC_013921:1915377:1920550192055019224391890Thermoanaerobacter italicus Ab9 chromosome, complete genomeTn7-like transposition protein D3e-28127
NC_014657:2127500:2132524213252421344011878Caldicellulosiruptor owensensis OL chromosome, complete genometn7-like transposition protein d1e-27124
NC_020050:1:2404924049253861338Cylindrospermum stagnale PCC 7417 plasmid pCYLST.01, partialhypothetical protein5e-25116
NC_010625:1602191:1620142162014216219951854Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencehypothetical protein3e-20100
NC_010501:5735656:5747606574760657490751470Pseudomonas putida W619, complete genomehypothetical protein1e-1791.3
NC_010512:1015557:1043446104344610452211776Burkholderia cenocepacia MC0-3 chromosome 3, complete sequencehypothetical protein3e-1377
NC_007492:6372900:6411722641172264134311710Pseudomonas fluorescens PfO-1, complete genomehypothetical protein8e-1375.5
NC_007974:138176:1611261611261624331308Ralstonia metallidurans CH34 chromosome 2, complete sequencehypothetical protein3e-1170.5
NC_004578:6334735:6342781634278163444721692Pseudomonas syringae pv. tomato str. DC3000, complete genometransposition protein, TnsD-related protein3e-1170.5
NC_015733:5955467:5966986596698659684641479Pseudomonas putida S16 chromosome, complete genomehypothetical protein3e-1170.1
NC_002947:6152500:6166911616691161685091599Pseudomonas putida KT2440, complete genometransposition protein, TnsD-related protein5e-1169.7
NC_010625:1602191:1619001161900116200171017Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencehypothetical protein6e-1169.3
NC_007974:138176:1624301624301641451716Ralstonia metallidurans CH34 chromosome 2, complete sequencehypothetical protein7e-1065.9
NC_016616:1091606:1125140112514011269121773Dechlorosoma suillum PS chromosome, complete genomehypothetical protein7e-1065.9
NC_007492:6372900:6409988640998864116731686Pseudomonas fluorescens PfO-1, complete genometransposition protein, TnsD-like protein1e-0965.1
NC_009349:3396:7627762792431617Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, completehypothetical protein2e-0757.8
NC_016616:1091606:1126937112693711284181482Dechlorosoma suillum PS chromosome, complete genomehypothetical protein7e-0755.8
NC_013959:1059004:1072504107250410740061503Sideroxydans lithotrophicus ES-1 chromosome, complete genomehypothetical protein8e-0755.8