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Query: NC_006512:1942000:1951858 Idiomarina loihiensis L2TR, complete genome

Start: 1951858, End: 1953855, Length: 1998

Host Lineage: Idiomarina loihiensis; Idiomarina; Idiomarinaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This is the type strain for this organism, which was isolated from a hydrothermal vent at a depth of 1300 m from the Lo'ihi Seamount southeast of Hawaii. This organism grows optimally in salt concentrations of 7.5 to 10%. Genome comparison has suggested that the bacterium has maintained its amino acid transport and degradation systems but lost sugar transport and certain sugar metabolic genes suggesting that it lives on amino acids rather than sugars. This may be in keeping with the environment this organism grows in, which is at hydrothermal deep sea vents that are characterized by collections of proteinaceous particles. This organism may colonize these particles by producing exopolysaccharides.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013166:784339:7991677991678013922226Kangiella koreensis DSM 16069, complete genometranscriptional regulator, CadC5e-1583.2
NC_008536:33776:3540835408380412634Solibacter usitatus Ellin6076, complete genomeserine/threonine protein kinase8e-1479.3
NC_020541:3156500:3165653316565331683102658Rhodanobacter sp. 2APBS1, complete genometranscriptional regulatory protein,protein kinase family protein6e-0860.1
NC_013730:906389:9063899063899094063018Spirosoma linguale DSM 74, complete genomeamidohydrolase6e-0860.1
NC_008536:8541267:8562673856267385637851113Solibacter usitatus Ellin6076, complete genometranscriptional regulatory protein-like protein2e-0655.1
NC_012125:793812:7938127938127951161305Salmonella enterica subsp. enterica serovar Paratyphi C straintranslocation protein TolB2e-0654.7
NC_013361:5319497:5326694532669453282321539Escherichia coli O26:H11 str. 11368 chromosome, complete genomeDNA-binding transcriptional activator CadC3e-0654.3
NC_010468:4252940:4272533427253342740711539Escherichia coli ATCC 8739, complete genometranscriptional regulator, CadC3e-0654.3