Pre_GI: BLASTP Hits

Some Help

Query: NC_006512:1942000:1942054 Idiomarina loihiensis L2TR, complete genome

Start: 1942054, End: 1943472, Length: 1419

Host Lineage: Idiomarina loihiensis; Idiomarina; Idiomarinaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This is the type strain for this organism, which was isolated from a hydrothermal vent at a depth of 1300 m from the Lo'ihi Seamount southeast of Hawaii. This organism grows optimally in salt concentrations of 7.5 to 10%. Genome comparison has suggested that the bacterium has maintained its amino acid transport and degradation systems but lost sugar transport and certain sugar metabolic genes suggesting that it lives on amino acids rather than sugars. This may be in keeping with the environment this organism grows in, which is at hydrothermal deep sea vents that are characterized by collections of proteinaceous particles. This organism may colonize these particles by producing exopolysaccharides.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010611:240839:251962251962252762801Acinetobacter baumannii ACICU, complete genomeBeta-lactamase class D5e-92338
NC_013446:2961647:296674129667412967490750Comamonas testosteroni CNB-2, complete genomeBeta-lactamase2e-79296
NC_009848:2335265:234922223492222350097876Bacillus pumilus SAFR-032, complete genomebeta-lactamase1e-36154
NC_010410:3606826:365687736568773657677801Acinetobacter baumannii AYE, complete genomeBeta-lactamase OXA-10 precursor3e-35149
NC_018012:1628364:164073916407391641515777Thiocystis violascens DSM 198 chromosome, complete genomebeta-lactamase class D4e-35149
NC_018012:3300000:331537333153733316149777Thiocystis violascens DSM 198 chromosome, complete genomebeta-lactamase class D7e-33142
NC_014976:2420000:244532924453292446132804Bacillus subtilis BSn5 chromosome, complete genomebeta-lactamase8e-32138
NC_013406:4023367:402336740233674024176810Paenibacillus sp. Y412MC10 chromosome, complete genomebeta-lactamase9e-31135
NC_020125:1853208:185320818532081854137930Riemerella anatipestifer RA-CH-2, complete genomeBeta-lactamase class D3e-28126
NC_016935:3103430:3106187310618731079861800Paenibacillus mucilaginosus 3016 chromosome, complete genomeregulatory protein BlaR12e-26120
NC_015690:2553837:2556660255666025584591800Paenibacillus mucilaginosus KNP414 chromosome, complete genomeregulatory protein BlaR16e-26119
NC_015977:3215770:3266112326611232679081797Roseburia hominis A2-183 chromosome, complete genomeBeta-lactamase8e-24112
NC_009975:1682000:170113517011351701734600Methanococcus maripaludis C6, complete genomeconserved hypothetical protein2e-21104
NC_015847:909938:911642911642912241600Methanococcus maripaludis XI chromosome, complete genomehypothetical protein3e-21103
NC_014376:3593500:3594074359407435958731800Clostridium saccharolyticum WM1 chromosome, complete genomeBeta-lactamase3e-21103
NC_005791:837505:839216839216839815600Methanococcus maripaludis S2, complete genomehypothetical protein4e-21102
NC_016860:4055117:407397340739734074848876Salmonella enterica subsp. enterica serovar Typhimurium strbeta-lactamase OXA-13e-20100
NC_017328:1075535:111008811100881110918831Shigella flexneri 2002017 chromosome, complete genomeOxacillinase3e-20100
NC_007109:1335037:135414913541491354949801Rickettsia felis URRWXCal2, complete genomeBeta-lactamase Class D3e-1893.6
NC_007940:97949:122469122469123269801Rickettsia bellii RML369-C, complete genomeClass D beta-lactamase8e-1789
NC_008609:142471:184864184864185730867Pelobacter propionicus DSM 2379, complete genomeBeta-lactamase1e-1688.2
NC_012633:1145500:115983911598391160552714Rickettsia africae ESF-5, complete genome2e-1584.3
NC_017347:2724313:2724313272431327260701758Staphylococcus aureus subsp. aureus T0131 chromosome, completeBlaR14e-1583.2
NC_013893:1723939:1722192172219217239491758Staphylococcus lugdunensis HKU09-01 chromosome, complete genomeBeta-lactamase regulatory sensor-transducer BlaR15e-1582.8
NC_006663:1:2651265144081758Staphylococcus epidermidis RP62A plasmid pSERP, complete sequenceregulatory protein BlaR13e-1480.1
NC_015376:1185000:119773711977371198543807Burkholderia gladioli BSR3 chromosome chromosome 2, completeBeta-lactamase3e-1273.6
NC_007650:420745:443933443933444742810Burkholderia thailandensis E264 chromosome II, complete sequencebeta-lactamase precursor4e-1273.2
NC_014366:588347:604821604821605651831Gamma proteobacterium HdN1, complete genomebeta-lactamase class D (Penicillin-binding protein) (OXA-9)3e-1170.5