Pre_GI: BLASTP Hits

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Query: NC_006511:792543:797638 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Start: 797638, End: 797973, Length: 336

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011147:792489:797584797584797919336Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein2e-39160
NC_016832:799764:804859804859805194336Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-38157
NC_004631:799810:804905804905805240336Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein2e-38157
NC_003198:2179688:219869621986962199031336Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein2e-38157
NC_012125:1632150:163722516372251637578354Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein1e-36151
NC_006905:2235607:225563422556342255969336Salmonella enterica subsp. enterica serovar Choleraesuis strputative inner membrane protein1e-36151
NC_011149:2179592:219870321987032199038336Salmonella enterica subsp. enterica serovar Agona str. SL483,putative inner membrane protein4e-34143