Pre_GI: BLASTP Hits

Some Help

Query: NC_006511:4465495:4465495 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Start: 4465495, End: 4466229, Length: 735

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011147:4460726:446072644607264461463738Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein1e-106385
NC_011080:2870428:288343428834342884129696Salmonella enterica subsp. enterica serovar Newport str. SL254,glycoprotein 31e-104379
NC_010102:2862178:286300328630032863740738Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-102371
NC_016857:2871689:289526428952642895959696Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74glycoprotein 34e-102370
NC_016810:2871689:289526428952642896067804Salmonella enterica subsp. enterica serovar Typhimurium strbacteriophage capsid protein5e-102370
NC_009436:3367194:337950033795003380231732Enterobacter sp. 638, complete genomehypothetical protein5e-71267
NC_007613:4217557:422250342225034223237735Shigella boydii Sb227, complete genomehypothetical protein4e-67254
NC_011740:448000:453384453384454184801Escherichia fergusonii ATCC 35469, complete genomeGlycoprotein 3 (Capsid size determination protein)9e-67253
NC_010468:49074:504805048051214735Escherichia coli ATCC 8739, complete genomehypothetical protein9e-67253
NC_010468:1130000:115162311516231152357735Escherichia coli ATCC 8739, complete genomehypothetical protein8e-66250
NC_013361:4959323:496073749607374961471735Escherichia coli O26:H11 str. 11368 chromosome, complete genomecapsid size determining protein9e-66249
NC_010498:4072681:408652440865244087258735Escherichia coli SMS-3-5, complete genomeglycoprotein 3, capsid size determination protein Sid7e-65246
NC_016845:575123:588482588482589219738Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein4e-62238
NC_021066:5342127:535991653599165360653738Raoultella ornithinolytica B6, complete genomehypothetical protein7e-62236
NC_013508:3593000:361063436106343610996363Edwardsiella tarda EIB202, complete genomehypothetical protein1e-20100
NC_012917:3684840:369080836908083691569762Pectobacterium carotovorum subsp. carotovorum PC1, complete genomehypothetical protein3e-2098.6
NC_012917:833721:839217839217839978762Pectobacterium carotovorum subsp. carotovorum PC1, complete genomehypothetical protein4e-1995.1
NC_015061:1251905:126414312641431264892750Rahnella sp. Y9602 chromosome, complete genomehypothetical protein5e-1065.1
NC_016818:1291665:130313713031371303886750Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completehypothetical protein1e-0963.9
NC_020211:996497:100840610084061009188783Serratia marcescens WW4, complete genomeNAD-dependent aldehyde dehydrogenase6e-0754.7
NC_009778:567000:597311597311598021711Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein7e-0651.2
NC_014121:677799:690064690064690807744Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative phage capsid protein8e-0650.8