Pre_GI: BLASTP Hits

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Query: NC_006511:3759550:3759550 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Start: 3759550, End: 3760035, Length: 486

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017046:3991551:399155139915513992075525Salmonella enterica subsp. enterica serovar Typhimurium str. 798PTS system transporter protein2e-89327
NC_003198:3855157:387690538769053877390486Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative PTS system protein6e-89325
NC_011149:3895921:389592138959213896406486Salmonella enterica subsp. enterica serovar Agona str. SL483,PTS system sorbose subfamily IIB component6e-89325
NC_011083:3985618:398561839856183986103486Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,PTS system sorbose subfamily IIB component6e-89325
NC_004631:3841975:386239538623953862880486Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative PTS system protein6e-89325
NC_009792:4693152:471149447114944711979486Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein8e-84308
NC_007946:3855445:386224338622433862728486Escherichia coli UTI89, complete genomeputative phosphotransferase system protein2e-31134
NC_008563:3888232:389503038950303895515486Escherichia coli APEC O1, complete genomehypothetical protein2e-31134
NC_011742:3799788:380977838097783810263486Escherichia coli S88 chromosome, complete genomePTS system mannose/fructose-specific transporter subunit IIA2e-31134
NC_014377:1897857:191102719110271911503477Thermosediminibacter oceani DSM 16646 chromosome, complete genomePTS system sorbose subfamily IIB component2e-25114
NC_009089:581655:582091582091582564474Clostridium difficile 630, complete genomePTS system, IIb component1e-24111
NC_014377:1897857:190819819081981908701504Thermosediminibacter oceani DSM 16646 chromosome, complete genomePTS system sorbose subfamily IIB component3e-24110
NC_015519:270637:289314289314289790477Tepidanaerobacter sp. Re1 chromosome, complete genomePTS system sorbose subfamily transporter subunit IIB9e-22102
NC_014334:2696000:270562927056292706099471Lactobacillus casei str. Zhang chromosome, complete genomePTS system sorbose subfamily transporter subunit IIB3e-2097.8
NC_015975:1936504:195217819521781953164987Lactobacillus ruminis ATCC 27782 chromosome, complete genomePTS system, mannose-specific IIAB component6e-2096.7
NC_011660:2509362:251816925181692519134966Listeria monocytogenes HCC23 chromosome, complete genomePTS system mannose-specific eiiab component (eiiab-man)2e-1994.4
NC_014106:419511:4506944506944517011008Lactobacillus crispatus ST1, complete genomePTS system, mannose-specific IIAB component4e-1890.5
NC_010723:1379256:139787513978751398852978Clostridium botulinum E3 str. Alaska E43, complete genomePTS system, mannose/fructose/sorbose family, IIB component4e-1890.5
NC_017047:3212000:321229332122933213255963Rahnella aquatilis HX2 chromosome, complete genomePTS system mannose-specific transporter subunit IIAB7e-1889.7
NC_015061:3147691:314769131476913148653963Rahnella sp. Y9602 chromosome, complete genomePTS system, mannose/fructose/sorbose family, IIB subunit7e-1889.7
NC_008530:1775841:178186117818611782859999Lactobacillus gasseri ATCC 33323, complete genomePhosphotransferase system, mannose/fructose-specific component IIA8e-1889.4
NC_012880:2399205:240136324013632402304942Dickeya dadantii Ech703, complete genomePTS system, mannose/fructose/sorbose family, IIB subunit8e-1889.4
NC_013504:1648551:165705116570511658046996Lactobacillus johnsonii FI9785 chromosome, complete genomephosphoenolpyruvate-dependent sugar phosphotransferase system EIIAB, probably mannose specific9e-1889.4
NC_016818:3148000:314822731482273149189963Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completePTS system mannose/fructose/sorbose family transporter subunit IIB1e-1789
NC_015602:1339067:1346038134603813470451008Lactobacillus kefiranofaciens ZW3 chromosome, complete genomeprotein-N(pi)-phosphohistidine--sugar phosphotransferase1e-1789
NC_008261:967973:969127969127970107981Clostridium perfringens ATCC 13124, complete genomePTS system, mannose/fructose/sorbose family, IIB component1e-1789
NC_005362:1870620:187806118780611879056996Lactobacillus johnsonii NCC 533, complete genomephosphoenolpyruvate-dependent sugar phosphotransferase system EIIAB, probable mannose specific2e-1788.6
NC_015389:1070500:110510911051091105606498Coriobacterium glomerans PW2 chromosome, complete genomePTS system sorbose subfamily IIB component3e-1787.8
NC_018528:1681060:1689111168911116901211011Lactobacillus helveticus R0052 chromosome, complete genomePTS system mannost-specific transporter subunits IIAB3e-1787.4
NC_014724:439594:4752374752374762471011Lactobacillus amylovorus GRL 1112 chromosome, complete genomePTS system, mannose-specific IIAB component3e-1787.4
NC_015214:437733:4748524748524758621011Lactobacillus acidophilus 30SC chromosome, complete genomePTS system, mannose-specific IIAB component4e-1787.4
NC_015425:841754:863643863643864116474Clostridium botulinum BKT015925 chromosome, complete genomePTS system mannose/fructose/sorbose family transporter subunit IIB7e-1786.3
NC_013199:392450:411366411366411860495Lactobacillus rhamnosus Lc 705, complete genomePTS system, sorbose IIB component7e-1786.3
NC_013198:394000:417573417573418049477Lactobacillus rhamnosus GG, complete genomePTS system, IIB component2e-1684.7
NC_013192:469771:485291485291486280990Leptotrichia buccalis DSM 1135, complete genomePTS system, mannose/fructose/sorbose family, IIA subunit5e-1683.6
NC_016612:2902628:292860929286092929085477Klebsiella oxytoca KCTC 1686 chromosome, complete genomePTS system fructose-specific transporter subunit IIB8e-1682.8
NC_020409:560278:572726572726573193468Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completePTS system sorbose subfamily IIB component9e-1682.8
NC_015975:1936504:195319519531951953710516Lactobacillus ruminis ATCC 27782 chromosome, complete genomePTS system, IIB component2e-1581.6
NC_012759:3143455:316538731653873165860474Escherichia coli BW2952 chromosome, complete genomePTS system N-acetylgalactosamine-specific transporter subunit IIB2e-1581.3
AC_000091:3258377:328007232800723280545474Escherichia coli W3110 DNA, complete genomeN-acetylgalactosamine-specific enzyme IIB component of PTS2e-1581.3
NC_010473:3354052:337598433759843376457474Escherichia coli str. K-12 substr. DH10B, complete genomeN-acetylgalactosamine-specific enzyme IIB component of PTS2e-1581.3
NC_004337:3249791:327073932707393271248510Shigella flexneri 2a str. 301, complete genomecytoplasmic transport protein N-acetylgalactosamine-specific IIB component 2 (EIIB-AGA)3e-1580.9
NC_004741:3240909:326185732618573262366510Shigella flexneri 2a str. 2457T, complete genomecytoplasmic transport protein N-acetylgalactosamine-specific IIB component 2 (EIIB-AGA)3e-1580.9
NC_013941:3884725:390905839090583909567510Escherichia coli O55:H7 str. CB9615 chromosome, complete genomePTS system subunit IIB3e-1580.9
NC_017328:3289853:331080233108023311311510Shigella flexneri 2002017 chromosome, complete genomePTS system, cytoplasmic, N-acetylgalactosamine-specific IIB component 23e-1580.9
NC_012967:3191319:321314532131453213618474Escherichia coli B str. REL606 chromosome, complete genomePTS system N-acetylgalactosamine-specific transporter subunit IIB4e-1580.5
CP002185:3475991:349792134979213498394474Escherichia coli W, complete genomeN-acetylgalactosamine-specific enzyme IIB component of PTS4e-1580.5
NC_015389:809474:818601818601819104504Coriobacterium glomerans PW2 chromosome, complete genomePTS system sorbose subfamily IIB component2e-1477.8
NC_009617:4436837:445214844521484452639492Clostridium beijerinckii NCIMB 8052 chromosome, complete genomePTS system mannose/fructose/sorbose family transporter subunit IIB3e-1477.8
NC_010380:124655:145788145788146264477Streptococcus pneumoniae Hungary19A-6, complete genomephosphotransferase system sugar-specific eiib component2e-1375.1
NC_014498:99015:120148120148120624477Streptococcus pneumoniae 670-6B chromosome, complete genomePTS system sugar-specific transporter subunit EIIB2e-1375.1
NC_013192:2434664:245368324536832454174492Leptotrichia buccalis DSM 1135, complete genomePTS system, mannose/fructose/sorbose family, IIB subunit2e-1374.7
NC_014844:1634985:165960816596081660072465Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomePTS system sorbose subfamily IIB component4e-1373.9
NC_002937:1706000:171632817163281716789462Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completePTS system, IIB component5e-1270.1
NC_014758:1489761:149108514910851491573489Calditerrivibrio nitroreducens DSM 19672 chromosome, completepts system sorbose subfamily iib component2e-1168.6
NC_016023:875416:885400885400885882483Bacillus coagulans 36D1 chromosome, complete genomePTS system sorbose subfamily transporter subunit IIB3e-1167.4
NC_015389:1977736:200771220077122008200489Coriobacterium glomerans PW2 chromosome, complete genomePTS system sorbose subfamily IIB component4e-1167
NC_013171:1808000:182302518230251823498474Anaerococcus prevotii DSM 20548, complete genomeprotein-N(pi)-phosphohistidine--sugar phosphotransferase9e-1062.8
NC_005139:518760:525878525878526366489Vibrio vulnificus YJ016 chromosome I, complete sequencephosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB1e-0962
NC_015389:1782825:179673517967351797214480Coriobacterium glomerans PW2 chromosome, complete genomeProtein-N(pi)-phosphohistidine--sugarphosphotran sferase2e-0961.6
NC_011294:4604283:462758746275874628048462Salmonella enterica subsp. enterica serovar Enteritidis strPTS system transporter subunit B7e-0959.7
NC_015968:3053565:306397530639753064280306Enterobacter asburiae LF7a chromosome, complete genomePTS system sorbose subfamily transporter subunit IIB1e-0858.9
NC_010067:1116148:112511011251101125607498Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-0754.3
NC_020063:4653422:466827946682794668776498Enterobacteriaceae bacterium strain FGI 57, complete genomephosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB7e-0753.1
NC_012962:869295:882141882141882623483Photorhabdus asymbiotica, complete genomepts system, n-acetylgalactosamine-specific iib component 2 (eiib-aga' (n-acetylgalactosamine-permease iib component 2) (phosphotransferas enzyme ii, b6e-0650.1
NC_005126:949226:967712967712968194483Photorhabdus luminescens subsp. laumondii TTO1, complete genomePTS system, N-acetylgalactosamine-specific IIB component 2 (EIIB-AGA') (N-acetylgalactosamine-permease IIB component 2) (Phosphotransferase enzyme II,8e-0649.7
NC_009442:1158268:116603411660341166525492Streptococcus suis 05ZYH33 chromosome, complete genomephosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB1e-0549.3