Pre_GI: BLASTP Hits

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Query: NC_006511:3364448:3381622 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Start: 3381622, End: 3382095, Length: 474

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002695:4153394:416700341670034167476474Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein2e-83307
NC_013282:3962188:397685039768503977323474Cronobacter turicensis, complete genomeProtein smg6e-82302
CP002185:3627992:364496036449603645433474Escherichia coli W, complete genomeconserved protein8e-82301
NC_011833:545713:545713545713546186474Buchnera aphidicola str. 5A (Acyrthosiphon pisum) chromosome,Smg protein2e-48191
NC_017252:545236:545236545236545709474Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum) chromosome,Smg protein1e-48191
NC_017253:545177:545177545177545650474Buchnera aphidicola str. JF99 (Acyrthosiphon pisum) chromosome,Smg protein1e-48191
NC_017254:545236:545236545236545709474Buchnera aphidicola str. JF98 (Acyrthosiphon pisum) chromosome,Smg protein1e-48191
NC_017255:545270:545270545270545743474Buchnera aphidicola str. LL01 (Acyrthosiphon pisum) chromosome,Smg protein1e-48191
NC_017256:545204:545204545204545677474Buchnera aphidicola str. Ak (Acyrthosiphon kondoi) chromosome,Smg protein2e-47187
NC_008577:44184:452034520345679477Shewanella sp. ANA-3 chromosome 1, complete sequenceprotein of unknown function DUF4944e-47186
NC_004061:540354:545080545080545553474Buchnera aphidicola str. Sg (Schizaphis graminum), complete genomeSmg protein4e-42170