Pre_GI: BLASTP Hits

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Query: NC_006511:3364448:3379653 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Start: 3379653, End: 3380471, Length: 819

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010067:4149298:414990241499024150723822Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-143508
CP002185:3627992:364298936429893643807819Escherichia coli W, complete genomedehydroshikimate reductase, NAD(P)-binding protein3e-125447
NC_002695:4153394:416503241650324165850819Escherichia coli O157:H7 str. Sakai, complete genomeshikimate 5-dehydrogenase3e-124444
NC_013282:3962188:397488539748853975703819Cronobacter turicensis, complete genomeShikimate dehydrogenase2e-114412
NC_008577:44184:486384863849516879Shewanella sp. ANA-3 chromosome 1, complete sequenceshikimate 5-dehydrogenase2e-66252
NC_004061:540354:543669543669544490822Buchnera aphidicola str. Sg (Schizaphis graminum), complete genomeshikimate 5-dehydrogenase2e-61236
NC_007614:620500:620577620577621410834Nitrosospira multiformis ATCC 25196 chromosome 1, completeshikimate 5-dehydrogenase2e-61236
NC_002946:1556000:157380215738021574611810Neisseria gonorrhoeae FA 1090, complete genomeputative shikimate dehydrogenase1e-59229
NC_017511:1467090:148588314858831486722840Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeputative shikimate dehydrogenase1e-59229
NC_011035:1564821:158304715830471583886840Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeputative shikimate dehydrogenase1e-59229
NC_003112:364869:364869364869365678810Neisseria meningitidis MC58, complete genomeshikimate 5-dehydrogenase5e-59228
NC_017516:364404:364404364404365213810Neisseria meningitidis H44/76 chromosome, complete genomeshikimate 5-dehydrogenase5e-59228
NC_003116:2063500:207914620791462079961816Neisseria meningitidis Z2491, complete genomeshikimate dehydrogenase7e-59227
NC_008767:1829500:184875318487531849562810Neisseria meningitidis FAM18, complete genomeshikimate dehydrogenase9e-59226
NC_017512:1824966:184383718438371844646810Neisseria meningitidis WUE 2594, complete genomeshikimate dehydrogenase9e-59226
NC_010120:1814592:183351518335151834324810Neisseria meningitidis 053442, complete genomeshikimate dehydrogenase2e-58225
NC_017514:1885154:190204319020431902852810Neisseria meningitidis M01-240149 chromosome, complete genomeshikimate 5-dehydrogenase5e-58224
NC_017518:2041282:205627220562722057081810Neisseria meningitidis NZ-05/33 chromosome, complete genomeshikimate 5-dehydrogenase5e-58224
NC_013016:1801000:181996818199681820777810Neisseria meningitidis alpha14 chromosome, complete genomeshikimate 5-dehydrogenase4e-58224
NC_004545:499709:511465511465512313849Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomeshikimate 5-dehydrogenase1e-57223
NC_015424:4251369:427545242754524276273822Aeromonas veronii B565 chromosome, complete genomeShikimate dehydrogenase3e-57221
NC_005061:214168:237684237684238568885Candidatus Blochmannia floridanus, complete genomeshikimate 5-dehydrogenase2e-55216
NC_017513:1845069:186073918607391861548810Neisseria meningitidis G2136 chromosome, complete genomeshikimate 5-dehydrogenase6e-55214
NC_008513:343540:353033353033353875843Buchnera aphidicola str. Cc (Cinara cedri), complete genomeAroE3e-54212
NC_014109:393500:414783414783415619837Candidatus Riesia pediculicola USDA chromosome, complete genomeshikimate 5-dehydrogenase3e-47188
NC_009512:3068495:306768030676803068498819Pseudomonas putida F1, complete genomeshikimate 5-dehydrogenase9e-46183
NC_017986:5467279:548320254832025484020819Pseudomonas putida ND6 chromosome, complete genomeshikimate 5-dehydrogenase2e-44179
NC_008786:2489104:249396824939682494834867Verminephrobacter eiseniae EF01-2, complete genomeshikimate 5-dehydrogenase7e-44177
NC_014924:3065430:308387430838743084725852Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeshikimate 5-dehydrogenase2e-42172
NC_009952:3596399:363194536319453632781837Dinoroseobacter shibae DFL 12, complete genomeshikimate dehydrogenase2e-26119
NC_014804:341663:351086351086351904819Thermococcus barophilus MP chromosome, complete genomeshikimate 5-dehydrogenase I alpha2e-26119
NC_019977:253895:258493258493259314822Methanomethylovorans hollandica DSM 15978, complete genomeshikimate 5-dehydrogenase3e-24112
NC_000868:416958:432656432656433450795Pyrococcus abyssi GE5, complete genomeshikimate 5-dehydrogenase4e-24111
NC_008044:3024125:302898630289863029816831Silicibacter sp. TM1040, complete genomeshikimate 5-dehydrogenase1e-23110
NC_014122:549932:588069588069588902834Methanocaldococcus infernus ME chromosome, complete genomeshikimate 5-dehydrogenase6e-23108
NC_015474:252390:275352275352276173822Pyrococcus sp. NA2 chromosome, complete genomeshikimate 5-dehydrogenase3e-23108
NC_009922:42696:466674666747527861Alkaliphilus oremlandii OhILAs, complete genomeshikimate 5-dehydrogenase2e-21102
NC_011979:3712845:373034837303483731220873Geobacter sp. FRC-32, complete genomeshikimate 5-dehydrogenase3e-2099
NC_007802:179780:187014187014187850837Jannaschia sp. CCS1, complete genomeShikimate 5-dehydrogenase4e-2098.6
NC_015387:1091403:111343611134361114248813Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeShikimate dehydrogenase6e-2097.8
NC_009785:1414892:141729314172931418150858Streptococcus gordonii str. Challis substr. CH1, complete genomeshikimate 5-dehydrogenase1e-1997.4
NC_007955:2074844:209948120994812100290810Methanococcoides burtonii DSM 6242, complete genomeshikimate 5-dehydrogenase1e-1997.1
NC_015696:47484:660136601366789777Francisella sp. TX077308 chromosome, complete genomeshikimate 5-dehydrogenase I alpha2e-1996.3
NC_008343:2389710:239037423903742391243870Granulibacter bethesdensis CGDNIH1, complete genomeshikimate 5-dehydrogenase8e-1994.4
NC_015519:1888917:189192318919231892795873Tepidanaerobacter sp. Re1 chromosome, complete genomeShikimate dehydrogenase3e-1789
NC_010814:1739706:176001217600121760893882Geobacter lovleyi SZ, complete genomeshikimate 5-dehydrogenase6e-1788.2
NC_008593:2281896:230243323024332303245813Clostridium novyi NT, complete genomeshikimate 5-dehydrogenase9e-1684.3
NC_016633:1798758:181916918191691820050882Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomeshikimate 5-dehydrogenase8e-1684.3
NC_007181:141299:149768149768150559792Sulfolobus acidocaldarius DSM 639, complete genomeshikimate/quinate 5-dehydrogenase7e-1684.3
NC_008261:817295:828901828901829716816Clostridium perfringens ATCC 13124, complete genomeshikimate 5-dehydrogenase1e-1584
NC_003366:863437:875075875075875890816Clostridium perfringens str. 13, complete genomeshikimate 5-dehydrogenase2e-1583.2
NC_005042:1719055:173579817357981736700903Prochlorococcus marinus subsp. marinus str. CCMP1375, completeShikimate 5-dehydrogenase1e-1480.5
NC_012108:2542328:254495725449572545772816Desulfobacterium autotrophicum HRM2, complete genomeAroE12e-1480.1
NC_015573:1979202:198059219805921981548957Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeShikimate dehydrogenase2e-1479.3
NC_008262:784878:814079814079814894816Clostridium perfringens SM101, complete genomeshikimate 5-dehydrogenase6e-1478.2
NC_004741:1792442:179361417936141794480867Shigella flexneri 2a str. 2457T, complete genomeshikimate 5-dehydrogenase1e-1273.9
NC_015151:1403500:140835914083591409162804Vulcanisaeta moutnovskia 768-28 chromosome, complete genomeshikimate dehydrogenase substrate binding domain protein1e-1273.6
NC_014960:216965:223354223354224232879Anaerolinea thermophila UNI-1, complete genomeshikimate dehydrogenase2e-1273.2
NC_015425:2528549:255259725525972553409813Clostridium botulinum BKT015925 chromosome, complete genomeshikimate 5-dehydrogenase2e-1170.1
NC_010125:1:145151451515372858Gluconacetobacter diazotrophicus PAl 5, complete genomeputative shikimate dehydrogenase2e-1169.7
NC_014221:554764:561386561386562216831Truepera radiovictrix DSM 17093 chromosome, complete genomeshikimate 5-dehydrogenase4e-1168.6
NC_012880:1585255:158825915882591589128870Dickeya dadantii Ech703, complete genomeShikimate dehydrogenase substrate binding domain protein5e-1065.1
NC_015977:2807782:284480328448032845672870Roseburia hominis A2-183 chromosome, complete genomeshikimate 5-dehydrogenase9e-1064.3
NC_015518:1095879:110422611042261105014789Acidianus hospitalis W1 chromosome, complete genomeShikimate dehydrogenase substrate binding domain-containing protein2e-0963.2
NC_013730:834500:860262860262861005744Spirosoma linguale DSM 74, complete genomeShikimate dehydrogenase substrate binding domain protein2e-0962.8
NC_013446:2164974:218289021828902183702813Comamonas testosteroni CNB-2, complete genomeshikimate 5-dehydrogenase3e-0962.8
NC_016002:2652500:267029226702922671170879Pseudogulbenkiania sp. NH8B, complete genomeshikimate dehydrogenase substrate binding domain containing protein3e-0962.4
NC_017275:1705827:171580417158041716613810Sulfolobus islandicus HVE10/4 chromosome, complete genomeshikimate dehydrogenase6e-0961.6
NC_012726:1685442:169172216917221692531810Sulfolobus islandicus M.16.4 chromosome, complete genomeshikimate dehydrogenase6e-0961.6
NC_012632:1785210:179149017914901792299810Sulfolobus islandicus M.16.27 chromosome, complete genomeshikimate dehydrogenase6e-0961.6
NC_012588:1655615:166559216655921666401810Sulfolobus islandicus M.14.25 chromosome, complete genomeshikimate dehydrogenase substrate binding domain-containing protein6e-0961.6
NC_009440:1810301:181730518173051818123819Metallosphaera sedula DSM 5348 chromosome, complete genomeshikimate dehydrogenase1e-0860.8
NC_015846:924087:926519926519927265747Capnocytophaga canimorsus Cc5 chromosome, complete genomeshikimate dehydrogenase9e-0960.8
NC_014614:2500301:250359825035982504434837Clostridium sticklandii, complete genomeShikimate dehydrogenase2e-0859.7
NC_009921:8549757:855440285544028555274873Frankia sp. EAN1pec, complete genomeShikimate dehydrogenase substrate binding domain protein5e-0858.5
NC_017291:829577:8295778295778310101434Chlamydophila psittaci C19/98 chromosome, complete genomebifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein6e-0858.2
NC_015470:831863:8318638318638332961434Chlamydophila psittaci 6BC chromosome, complete genomebifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein6e-0858.2
NC_003106:2272313:228195322819532282735783Sulfolobus tokodaii str. 7, complete genomehypothetical shikimate 5-dehydrogenase1e-0757.4
NC_014355:399938:404381404381405235855Candidatus Nitrospira defluvii, complete genomeshikimate 5-dehydrogenase1e-0757
NC_016790:1259356:129968812996881300530843Corynebacterium diphtheriae VA01 chromosome, complete genomeshikimate 5-dehydrogenase3e-0755.8
NC_016787:1276983:132230613223061323148843Corynebacterium diphtheriae HC03 chromosome, complete genomeshikimate 5-dehydrogenase3e-0755.8
NC_002935:1315019:135919613591961360065870Corynebacterium diphtheriae NCTC 13129, complete genomeshikimate 5-dehydrogenase4e-0755.5
NC_010557:316000:330534330534331370837Burkholderia ambifaria MC40-6 chromosome 3, complete sequenceShikimate dehydrogenase substrate binding domain protein4e-0755.5
NC_016782:1316467:133288813328881333730843Corynebacterium diphtheriae 241 chromosome, complete genomeshikimate 5-dehydrogenase4e-0755.5
NC_016786:1316436:133285813328581333700843Corynebacterium diphtheriae HC01 chromosome, complete genomeshikimate 5-dehydrogenase4e-0755.5
NC_016802:1317365:133378713337871334629843Corynebacterium diphtheriae HC02 chromosome, complete genomeshikimate 5-dehydrogenase4e-0755.5
NC_016783:1313008:135718813571881358030843Corynebacterium diphtheriae INCA 402 chromosome, complete genomeshikimate 5-dehydrogenase4e-0755.5
NC_016788:1315877:133229913322991333141843Corynebacterium diphtheriae HC04 chromosome, complete genomeshikimate 5-dehydrogenase4e-0755.5
NC_016789:1334514:137869613786961379538843Corynebacterium diphtheriae PW8 chromosome, complete genomeshikimate 5-dehydrogenase7e-0754.7
NC_016799:1343020:138834013883401389182843Corynebacterium diphtheriae 31A chromosome, complete genomeshikimate 5-dehydrogenase7e-0754.7
NC_016800:1344189:136145213614521362294843Corynebacterium diphtheriae BH8 chromosome, complete genomeshikimate 5-dehydrogenase7e-0754.7
NC_016801:1361597:137801613780161378858843Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeshikimate 5-dehydrogenase7e-0754.7
NC_015563:2702787:270994927099492710788840Delftia sp. Cs1-4 chromosome, complete genomeShikimate dehydrogenase8e-0754.3
NC_007963:317291:332550332550333416867Chromohalobacter salexigens DSM 3043, complete genomeShikimate 5-dehydrogenase2e-0653.5
NC_016785:1297208:131447113144711315313843Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeshikimate 5-dehydrogenase4e-0652.4