Pre_GI: BLASTP Hits

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Query: NC_006511:3364448:3379399 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Start: 3379399, End: 3379656, Length: 258

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
CP002185:3627992:364273536427353642992258Escherichia coli W, complete genomeconserved protein1e-24111
NC_010067:4149298:415072041507204150977258Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-34144
NC_002695:4153394:416477841647784165035258Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein4e-24109
NC_013282:3962188:397463139746313974888258Cronobacter turicensis, complete genomeUncharacterized protein yrdB9e-2198.6