Pre_GI: BLASTP Hits

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Query: NC_006511:3364448:3373295 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Start: 3373295, End: 3373367, Length: 73

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009436:203365:22064522064522072076Enterobacter sp. 638, complete genometRNA-Thr5e-0649.7
NC_002695:4153394:41585854158585415866076Escherichia coli O157:H7 str. Sakai, complete genometRNA-Thr5e-0649.7
CP002185:3627992:36365413636541363661676Escherichia coli W, complete genometRNA-Thr5e-0649.7
NC_010067:4149298:41573414157341415741373Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completetRNA-Thr6e-0649.7