Pre_GI: BLASTP Hits

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Query: NC_006511:3364448:3366550 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Start: 3366550, End: 3367212, Length: 663

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010067:4149298:416320141632014163884684Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-119427
NC_015566:1127595:116103711610371161717681Serratia sp. AS12 chromosome, complete genomeTetR family transcriptional regulator3e-39161
NC_015567:1127780:116122211612221161902681Serratia sp. AS9 chromosome, complete genomeTetR family transcriptional regulator3e-39161
NC_016002:2453919:247109424710942471732639Pseudogulbenkiania sp. NH8B, complete genomeTetR family transcriptional regulator1e-27123
NC_015424:3112637:315280931528093153447639Aeromonas veronii B565 chromosome, complete genomeTetR family transcriptional regulator1e-23110
NC_008570:3220539:327467032746703275311642Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeTetR family regulatory protein4e-23108
NC_008752:415599:420283420283420975693Acidovorax avenae subsp. citrulli AAC00-1, complete genometranscriptional regulator, TetR family1e-1893.2
NC_009439:918534:937355937355937975621Pseudomonas mendocina ymp, complete genomeTetR family transcriptional regulator6e-1787.4
NC_014910:465980:472096472096472716621Alicycliphilus denitrificans BC chromosome, complete genomeregulatory protein tetr8e-1787
NC_007947:1703326:170922317092231709855633Methylobacillus flagellatus KT, complete genometranscriptional regulator, TetR family2e-1479
NC_010002:528529:533152533152533817666Delftia acidovorans SPH-1, complete genometranscriptional regulator, TetR family1e-1273.2
NC_013665:2132000:213526921352692135904636Methanocella paludicola SANAE, complete genomeTetR family transcriptional regulator2e-1272.8
NC_007953:572926:596866596866597480615Burkholderia xenovorans LB400 chromosome 3, complete sequenceTranscriptional regulator, TetR family9e-1063.5
NC_010170:4409683:442852144285214429150630Bordetella petrii, complete genomePutative HTH-type transcriptional regulator, AcrR-family9e-0857
NC_016906:3286384:3287341328734132885641224Gordonia polyisoprenivorans VH2 chromosome, complete genomeputative TetR family transcriptional regulator2e-0755.8
NC_007298:1759881:179978717997871800392606Dechloromonas aromatica RCB, complete genomeregulatory protein, TetR8e-0753.9
NC_014376:1586649:158664915866491587239591Clostridium saccharolyticum WM1 chromosome, complete genometranscriptional regulator, TetR family9e-0753.5
NC_008699:2916752:293651429365142937146633Nocardioides sp. JS614, complete genomeregulatory protein, TetR3e-0652.4
NC_013595:9994000:100114381001143810012019582Streptosporangium roseum DSM 43021, complete genomeputative transcriptional regulator, TetR family3e-0652
NC_016935:4367000:440472344047234405346624Paenibacillus mucilaginosus 3016 chromosome, complete genomeputative transcriptional regulator4e-0651.6
NC_006361:498305:504157504157504795639Nocardia farcinica IFM 10152, complete genomeputative transcriptional regulator6e-0651.2