Pre_GI: BLASTP Hits

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Query: NC_006511:3079512:3101008 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Start: 3101008, End: 3101931, Length: 924

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011147:3075186:309668230966823097605924Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein0640
NC_011149:3187022:320846632084663209389924Salmonella enterica subsp. enterica serovar Agona str. SL483,polysaccharide deacetylase domain protein0639
NC_016832:3100683:312216831221683123091924Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Polysaccharide deacetylase domain protein0637
NC_004631:3112043:313352831335283134451924Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein0637
NC_003198:3126548:314803331480333148956924Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein0637
NC_015761:2982000:299749029974902998413924Salmonella bongori NCTC 12419, complete genomehypothetical protein6e-177620
NC_010623:1871492:191206019120601912875816Burkholderia phymatum STM815 chromosome 2, complete sequencepolysaccharide deacetylase6e-55214
NC_012660:2143376:216172721617272162608882Pseudomonas fluorescens SBW25 chromosome, complete genomeputative polysaccharide deacetylase1e-53210
NC_010002:2293670:229592822959282296803876Delftia acidovorans SPH-1, complete genomepolysaccharide deacetylase3e-53209
NC_015563:5162177:518298451829845183859876Delftia sp. Cs1-4 chromosome, complete genomepolysaccharide deacetylase3e-53208
NC_017506:3717261:372957637295763730442867Marinobacter adhaerens HP15 chromosome, complete genomepolysaccharide deacetylase family protein7e-51201
NC_016612:5231065:527899252789925279873882Klebsiella oxytoca KCTC 1686 chromosome, complete genomeCyclic imide hydrolase3e-50199
NC_013739:2106662:213531321353132136215903Conexibacter woesei DSM 14684, complete genomepolysaccharide deacetylase1e-49197
NC_017047:2079368:209035720903572091238882Rahnella aquatilis HX2 chromosome, complete genomeCyclic imide hydrolase7e-50197
NC_011958:1031592:106842910684291069331903Rhodobacter sphaeroides KD131 chromosome 2, complete genomePolysaccharide deacetylase2e-47189
NC_017955:3057592:305669930566993057595897Modestobacter marinus, complete genomepolysaccharide deacetylase1e-42173
NC_020210:1275031:131125713112571312117861Geobacillus sp. GHH01, complete genomepolysaccharide deacetylase7e-42171
NC_009380:4184695:4200363420036342014991137Salinispora tropica CNB-440 chromosome, complete genomepolysaccharide deacetylase8e-42171
NC_002927:2636694:263852926385292639383855Bordetella bronchiseptica RB50, complete genomehypothetical protein1e-36154
NC_013201:145973:145973145973146869897Halomicrobium mukohataei DSM 12286 plasmid pHmuk01, completepolysaccharide deacetylase2e-35149
NC_015733:3736104:380239938023993803064666Pseudomonas putida S16 chromosome, complete genomepolysaccharide deacetylase family protein3e-31135
NC_008786:3915000:393196539319653932885921Verminephrobacter eiseniae EF01-2, complete genomepolysaccharide deacetylase2e-28126
NC_015733:1976752:199243619924361993092657Pseudomonas putida S16 chromosome, complete genomeurate catabolism protein6e-1995.1
NC_017192:1063955:106999310699931070919927Arcobacter sp. L, complete genomeputative polysaccharide deacetylase3e-1789.4
NC_018681:5695343:571241557124155713284870Nocardia brasiliensis ATCC 700358 chromosome, complete genomepolysaccharide deacetylase1e-1584.3
NC_004347:4302768:4326131432613143271351005Shewanella oneidensis MR-1, complete genomepolysaccharide deacetylase family protein3e-1479.3
NC_019970:1343670:134493613449361345643708Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeputative xylanase/chitin deacetylase8e-1374.7
NC_012997:2059092:209738120973812098364984Teredinibacter turnerae T7901, complete genomecarbohydrate esterase family 4 domain protein1e-1273.9
NC_010995:671389:688838688838689734897Cellvibrio japonicus Ueda107, complete genomepolysaccharide deacetylase protein, putative, pda4B7e-1271.6
NC_008314:477722:487881487881488759879Ralstonia eutropha H16 chromosome 2, complete sequencechitooligosaccharide deacetylase8e-1271.2
NC_014640:3808639:381335538133553814152798Achromobacter xylosoxidans A8 chromosome, complete genomepolysaccharide deacetylase2e-1170.1
NC_010002:2293670:231604723160472317003957Delftia acidovorans SPH-1, complete genomeurate catabolism protein4e-1168.9
NC_012691:2146473:215020721502072151130924Tolumonas auensis DSM 9187, complete genomeurate catabolism protein5e-1168.6
NC_008786:3915000:393079439307943931735942Verminephrobacter eiseniae EF01-2, complete genomehypothetical protein8e-1168.2
NC_008043:499399:4993994993995008141416Silicibacter sp. TM1040 mega plasmid, complete sequencepolysaccharide deacetylase1e-1067.8
NC_008609:2643000:267289026728902673795906Pelobacter propionicus DSM 2379, complete genomepolysaccharide deacetylase1e-1067.8
NC_009381:1783886:182352618235261824476951Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein1e-1067.4
NC_020541:3156500:321777332177733218684912Rhodanobacter sp. 2APBS1, complete genomepolysaccharide deactylase family protein, PEP-CTERM locus subfamily2e-1067
NC_011898:649000:652866652866653642777Clostridium cellulolyticum H10, complete genomepolysaccharide deacetylase2e-1066.6
NC_009483:2640403:273017127301712731052882Geobacter uraniireducens Rf4 chromosome, complete genomepolysaccharide deacetylase4e-1065.5
NC_010995:4083960:410826241082624109128867Cellvibrio japonicus Ueda107, complete genomepolysaccharide deacetylase, putative, pda4C6e-1065.1
NC_011832:820658:855762855762856685924Candidatus Methanosphaerula palustris E1-9c, complete genomepolysaccharide deacetylase9e-1064.7
NC_014315:1956695:196060719606071961428822Nitrosococcus watsoni C-113 chromosome, complete genomepolysaccharide deactylase family protein8e-1064.7
NC_004668:546142:5499765499765515261551Enterococcus faecalis V583, complete genomepolysaccharide deacetylase family protein1e-0963.9
NC_007517:2241104:224331222433122244154843Geobacter metallireducens GS-15, complete genomePolysaccharide deacetylase2e-0963.2
NC_018679:3197347:321537932153793216218840Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completepolysaccharide deacetylase3e-0962.8
NC_013216:3376186:337888433788843379771888Desulfotomaculum acetoxidans DSM 771, complete genomepolysaccharide deacetylase3e-0962.8
NC_008228:1404126:141382314138231414668846Pseudoalteromonas atlantica T6c, complete genomepolysaccharide deacetylase4e-0962.4
NC_020995:1205524:1232636123263612341981563Enterococcus casseliflavus EC20, complete genomehypothetical protein4e-0962.4
NC_020389:1117509:112107611210761121981906Methanosarcina mazei Tuc01, complete genomePolysaccharide deacetylase5e-0962
NC_008596:4196194:421125942112594212110852Mycobacterium smegmatis str. MC2 155, complete genomepolysaccharide deacetylase family protein8e-0961.6
NC_011146:1998981:204586820458682046707840Geobacter bemidjiensis Bem, complete genomepolysaccharide deactylase family protein, PEP-CTERM locus subfamily1e-0860.8
NC_003901:1947491:195498919549891955840852Methanosarcina mazei Go1, complete genomeputative polysaccharide deacetylase1e-0860.8
NC_014915:1880748:189766318976631898277615Geobacillus sp. Y412MC52 chromosome, complete genomepolysaccharide deacetylase2e-0860.5
NC_013411:2739989:275772527577252758339615Geobacillus sp. Y412MC61, complete genomepolysaccharide deacetylase2e-0860.5
NC_020389:1683120:169151216915121692339828Methanosarcina mazei Tuc01, complete genomePolysaccharide deacetylase1e-0860.5
NC_003552:1259356:1276872127687212785961725Methanosarcina acetivorans C2A, complete genomepolysaccharide deacetylase3e-0859.7
NC_008312:6072000:607467760746776075351675Trichodesmium erythraeum IMS101, complete genomepolysaccharide deacetylase3e-0859.3
NC_007298:2568851:259126325912632592102840Dechloromonas aromatica RCB, complete genomePolysaccharide deacetylase3e-0859.3
NC_014972:322056:330748330748331567820Desulfobulbus propionicus DSM 2032 chromosome, complete genome4e-0858.9
NC_011769:820521:825356825356826207852Desulfovibrio vulgaris str. 'Miyazaki F', complete genomepolysaccharide deactylase family protein, PEP-CTERM locus subfamily7e-0858.2
NC_014910:755192:778981778981779847867Alicycliphilus denitrificans BC chromosome, complete genomepolysaccharide deactylase family protein, pep-cterm locus subfamily7e-0858.2
NC_019892:6801246:6808924680892468099911068Singulisphaera acidiphila DSM 18658 chromosome, complete genomepolysaccharide deactylase family protein, PEP-CTERM locus subfamily7e-0858.2
NC_015422:704500:718308718308719174867Alicycliphilus denitrificans K601 chromosome, complete genomepolysaccharide deactylase family protein8e-0858.2
NC_014973:1992694:199269419926941993593900Geobacter sp. M18 chromosome, complete genomepolysaccharide deactylase family protein9e-0857.8
NC_008789:1641774:164411616441161645021906Halorhodospira halophila SL1, complete genomepolysaccharide deacetylase9e-0857.8
NC_015573:3070582:308071530807153081674960Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomedelta-lactam-biosynthetic de-N-acetylase1e-0757.4
NC_021175:845370:8627508627508641471398Streptococcus oligofermentans AS 1.3089, complete genomepeptidoglycan N-acetylglucosamine deacetylase A2e-0757
NC_019974:2889375:291822529182252919118894Natronococcus occultus SP4, complete genomeputative xylanase/chitin deacetylase2e-0756.6
NC_009328:1867971:188145218814521882078627Geobacillus thermodenitrificans NG80-2 chromosome, complete genomexylanase/chitin deacetylase2e-0756.6
NC_019897:329945:333467333467334267801Thermobacillus composti KWC4 chromosome, complete genomepolysaccharide deacetylase family sporulation protein PdaB2e-0756.6
NC_015497:3739556:376112837611283761967840Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomepolysaccharide deactylase family protein, PEP-CTERM locus subfamily2e-0756.6
NC_011283:2627050:263016326301632631095933Klebsiella pneumoniae 342 chromosome, complete genomeurate catabolism protein3e-0756.2
NC_012731:2693091:270320627032062704138933Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative polysaccharide deacetylase3e-0756.2
NC_013960:3326955:333326233332623334101840Nitrosococcus halophilus Nc4 chromosome, complete genomepolysaccharide deactylase family protein, PEP-CTERM locus subfamily4e-0755.8
NC_018524:5066720:5069718506971850712921575Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomepolysaccharide deacetylase family protein4e-0755.8
NC_013850:2624899:262801226280122628944933Klebsiella variicola At-22 chromosome, complete genomeurate catabolism protein4e-0755.8
NC_015572:1421782:145045514504551451321867Methylomonas methanica MC09 chromosome, complete genomepolysaccharide deactylase family protein, PEP-CTERM locus subfamily5e-0755.5
NC_016845:2729654:274534927453492746188840Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,urate catabolism protein5e-0755.5
NC_019978:686362:689294689294690064771Halobacteroides halobius DSM 5150, complete genomeputative xylanase/chitin deacetylase5e-0755.5
NC_021064:31816:3851138511400041494Propionibacterium avidum 44067, complete genomehypothetical protein6e-0755.1
NC_009648:1956070:196958619695861970518933Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative polysaccharide deacetylase6e-0755.1
NC_018868:1960542:200048920004892001361873Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomepolysaccharide deacetylase pda4C8e-0754.7
NC_007645:2779381:278976927897692790626858Hahella chejuensis KCTC 2396, complete genomepredicted xylanase/chitin deacetylase7e-0754.7
NC_009089:3782000:380325438032543804018765Clostridium difficile 630, complete genomeprobable polysaccharide deacetylase1e-0654.3
NC_010321:562494:565896565896566768873Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completepolysaccharide deacetylase1e-0654.3
NC_014964:557910:561312561312562184873Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completedelta-lactam-biosynthetic de-N-acetylase1e-0654.3
NC_015660:3643370:364638236463823647110729Geobacillus thermoglucosidasius C56-YS93 chromosome, completepolysaccharide deacetylase2e-0653.5
NC_012108:2220983:222606122260612226927867Desulfobacterium autotrophicum HRM2, complete genomepolysaccharide deacetylase family protein2e-0653.1
NC_014650:3589604:359136435913643592098735Geobacillus sp. Y4.1MC1 chromosome, complete genomepolysaccharide deacetylase2e-0653.1
NC_017179:3621306:363689736368973637661765Clostridium difficile BI1, complete genomepolysaccharide deacetylase3e-0652.8
NC_013315:3613288:362887936288793629643765Clostridium difficile CD196 chromosome, complete genomepolysaccharide deacetylase3e-0652.8
NC_014103:3985897:398922839892283990208981Bacillus megaterium DSM319 chromosome, complete genomesporulation protein, polysaccharide deacetylase family5e-0652
NC_009328:448224:449944449944450735792Geobacillus thermodenitrificans NG80-2 chromosome, complete genomespore coat N-acetylmuramic acid deacetylase8e-0651.2