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Query: NC_006511:3079512:3099418 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Start: 3099418, End: 3099801, Length: 384

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011147:3075186:309509230950923095475384Salmonella enterica subsp. enterica serovar Paratyphi A strDNA replication/recombination/repair protein1e-69260
NC_015761:2982000:299606129960612996471411Salmonella bongori NCTC 12419, complete genomehypothetical protein2e-44177
NC_011149:3187022:320687232068723207084213Salmonella enterica subsp. enterica serovar Agona str. SL483,putative cytoplasmic protein7e-33139
NC_016832:3100683:312057731205773120786210Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Anti-adapter protein iraD8e-33138
NC_007946:4875997:491931349193134919696384Escherichia coli UTI89, complete genomehypothetical protein YjiD3e-1787
NC_008253:4817864:485980348598034860186384Escherichia coli 536, complete genomehypothetical protein YjiD4e-1786.7