Pre_GI: BLASTP Hits

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Query: NC_006511:3079512:3096335 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Start: 3096335, End: 3097636, Length: 1302

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011147:3075186:3092009309200930933101302Salmonella enterica subsp. enterica serovar Paratyphi A stroxidoreductase0892
NC_011149:3187022:3203793320379332050941302Salmonella enterica subsp. enterica serovar Agona str. SL483,tyramine oxidase0889
NC_003198:3126548:3143359314335931446601302Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative oxidoreductase0889
NC_004631:3112043:3128854312885431301551302Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative oxidoreductase0889
NC_016832:3100683:3117494311749431187951302Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,FAD dependent oxidoreductase0885
NC_020209:1986503:1987741198774119890481308Pseudomonas poae RE*1-1-14, complete genomeputative oxidoreductase1e-133476
NC_004129:2609189:2612145261214526134251281Pseudomonas fluorescens Pf-5, complete genomeD-amino acid oxidase family protein3e-73275
NC_009831:1255995:1261914126191412632001287Shewanella sediminis HAW-EB3, complete genomeFAD dependent oxidoreductase1e-72273
NC_020064:1962172:1988844198884419901241281Serratia marcescens FGI94, complete genomeglycine/D-amino acid oxidase, deaminating6e-72271
NC_016830:2247789:2252646225264622539291284Pseudomonas fluorescens F113 chromosome, complete genomeFAD dependent oxidoreductase1e-71271
NC_015379:4691868:4709329470932947106121284Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative Gamma-glutamylputrescine oxidoreductase2e-71270
NC_014618:1809369:1830332183033218316121281Enterobacter cloacae SCF1 chromosome, complete genomeFAD dependent oxidoreductase2e-70266
NC_018868:1352000:1373014137301413743121299Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeFAD dependent oxidoreductase5e-70265
NC_013716:357928:3920993920993933791281Citrobacter rodentium ICC168, complete genomegamma-glutamylputrescine oxidoreductase4e-69262
NC_015410:3209954:3228986322898632302691284Pseudomonas mendocina NK-01 chromosome, complete genomeFAD dependent oxidoreductase6e-69261
NC_014306:3210311:3232148323214832334251278Erwinia billingiae Eb661, complete genomegamma-glutamylputrescine oxidoreductase1e-67257
NC_009434:2577717:2592176259217625934591284Pseudomonas stutzeri A1501, complete genomeglycine/D-amino acid oxidase3e-67256
NC_007963:1370903:1373441137344113747421302Chromohalobacter salexigens DSM 3043, complete genomeFAD dependent oxidoreductase9e-66251
NC_012560:2026483:2028581202858120298641284Azotobacter vinelandii DJ, complete genomeFAD-dependent oxidoreductase1e-65250
NC_021150:2026496:2028594202859420298771284Azotobacter vinelandii CA6, complete genomeFAD-dependent oxidoreductase1e-65250
NC_009997:2967521:2987703298770329889921290Shewanella baltica OS195, complete genomeFAD dependent oxidoreductase2e-64246
NC_016901:2916988:2937170293717029384591290Shewanella baltica OS678 chromosome, complete genomeFAD dependent oxidoreductase2e-64246
NC_015731:1578106:1611021161102116123341314Nitrosomonas sp. Is79A3 chromosome, complete genomeFAD dependent oxidoreductase3e-60233
NC_007963:1370903:1372060137206013733491290Chromohalobacter salexigens DSM 3043, complete genomeFAD dependent oxidoreductase1e-58227
NC_009049:2131017:2153752215375221550531302Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequenceFAD dependent oxidoreductase2e-58227
NC_011001:2327633:2330909233090923321981290Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative gamma-glutamylputrescine oxidoreductase6e-58225
NC_010515:2037825:2040487204048720417551269Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceFAD dependent oxidoreductase2e-40166
NC_010184:3213347:3223776322377632250621287Bacillus weihenstephanensis KBAB4, complete genomeFAD dependent oxidoreductase3e-40166
NC_010552:2331486:2346923234692323488781956Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceFAD dependent oxidoreductase1e-39164
NC_009937:5033152:5054695505469550559901296Azorhizobium caulinodans ORS 571, complete genomeconserved hypothetical protein3e-39163
NC_007511:1681764:1686305168630516876661362Burkholderia sp. 383 chromosome 2, complete sequenceFAD dependent oxidoreductase4e-35149
NC_015593:463477:4682984682984697701473Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeFAD dependent oxidoreductase1e-34147
NC_008027:2648560:2665935266593526673291395Pseudomonas entomophila L48, complete genomeoxidoreductase1e-33144
NC_011595:2616861:2618212261821226196571446Acinetobacter baumannii AB307-0294, complete genomegamma-glutamylputrescine oxidoreductase2e-32140
NC_017171:1331794:1336404133640413378791476Acinetobacter baumannii MDR-ZJ06 chromosome, complete genomeglycine/D-amino acid oxidase (deaminating)5e-32139
NC_020829:4390417:4417069441706944184451377Pseudomonas denitrificans ATCC 13867, complete genomeD-amino-acid dehydrogenase2e-30133
NC_015733:2581324:2600910260091026023011392Pseudomonas putida S16 chromosome, complete genomeaminophosphonate oxidoreductase6e-30132
NC_015458:2441435:2447150244715024485021353Pusillimonas sp. T7-7 chromosome, complete genomehypothetical protein7e-30132
NC_007794:262402:2663312663312676621332Novosphingobium aromaticivorans DSM 12444, complete genomeFAD dependent oxidoreductase8e-29128
NC_005126:2756984:2762449276244927640021554Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein3e-28126
NC_009092:2282437:2317214231721423185451332Shewanella loihica PV-4, complete genomeFAD dependent oxidoreductase2e-28126
NC_011894:983572:9866949866949880761383Methylobacterium nodulans ORS 2060, complete genomeFAD dependent oxidoreductase2e-27124
NC_011770:3396637:3406873340687334082401368Pseudomonas aeruginosa LESB58, complete genomephytoene dehydrogenase2e-27124
NC_005966:2699483:2740002274000227413751374Acinetobacter sp. ADP1, complete genomeputative oxidoreductase5e-27122
NC_012962:1317602:1342905134290513444461542Photorhabdus asymbiotica, complete genomefad dependent oxidoreductase2e-25117
NC_003063:1019674:1024454102445410257761323Agrobacterium tumefaciens str. C58 chromosome linear, completehypothetical protein2e-25117
NC_003305:1035342:1048980104898010502901311Agrobacterium tumefaciens str. C58 chromosome linear, completeoxidoreductase2e-25117
NC_009512:1025365:1029857102985710312631407Pseudomonas putida F1, complete genomeFAD dependent oxidoreductase4e-25116
NC_018750:4333064:4351217435121743526051389Streptomyces venezuelae ATCC 10712, complete genomeGlycine or D-amino acid oxidases5e-25115
NC_016114:3275004:3287754328775432891541401Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeFAD dependent oxidoreductase1e-23111
NC_016625:171341:1988681988682001451278Burkholderia sp. YI23 chromosome 2, complete sequenceFAD dependent oxidoreductase3e-23110
NC_012522:5987644:5987644598764459890681425Rhodococcus opacus B4, complete genomeputative oxidoreductase3e-22106
NC_011894:3820000:3826585382658538278561272Methylobacterium nodulans ORS 2060, complete genomeFAD dependent oxidoreductase6e-22105
NC_012522:2931910:2946241294624129476441404Rhodococcus opacus B4, complete genomeputative oxidoreductase6e-22105
NC_015379:4426827:4435395443539544366001206Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative oxidoreductase8e-22105
NC_014306:4106569:4110719411071941120351317Erwinia billingiae Eb661, complete genomeFAD dependent oxidoreductase1e-21104
NC_013524:969038:9844709844709858701401Sphaerobacter thermophilus DSM 20745 chromosome 2, complete genomeFAD dependent oxidoreductase4e-1996.3
NC_016002:2825017:2832760283276028340821323Pseudogulbenkiania sp. NH8B, complete genomeFAD dependent oxidoreductase1e-1894.7
NC_008254:611437:6268746268746281811308Mesorhizobium sp. BNC1, complete genomeFAD dependent oxidoreductase6e-1892.4
NC_016002:2591189:2600136260013626014551320Pseudogulbenkiania sp. NH8B, complete genomeFAD dependent oxidoreductase5e-1789.4
NC_017223:3345902:3347967334796733494061440Bordetella pertussis CS chromosome, complete genomehypothetical protein3e-1687
NC_002929:3305682:3307747330774733091861440Bordetella pertussis Tohama I, complete genomehypothetical protein3e-1687
NC_017138:1812000:1830179183017918313871209Bacillus megaterium WSH-002 chromosome, complete genomeoxidoreductase2e-1584
NC_018644:1197897:1212560121256012138461287Alpha proteobacterium HIMB59 chromosome, complete genomeFAD dependent oxidoreductase1e-1377.8
NC_015733:2581324:2606631260663126078361206Pseudomonas putida S16 chromosome, complete genomeFAD dependent oxidoreductase protein2e-1377
NC_013926:71186:8478584785859421158Aciduliprofundum boonei T469 chromosome, complete genomeFAD dependent oxidoreductase1e-1171.2
NC_009718:643200:6625756625756637471173Fervidobacterium nodosum Rt17-B1, complete genomeFAD dependent oxidoreductase2e-1170.5
NC_018644:446102:4680564680564693901335Alpha proteobacterium HIMB59 chromosome, complete genomeFAD dependent oxidoreductase3e-1170.1
NC_015733:2581324:2609343260934326106681326Pseudomonas putida S16 chromosome, complete genomeFAD dependent oxidoreductase7e-1168.9
NC_016642:4517478:4521305452130545225701266Pseudovibrio sp. FO-BEG1 chromosome, complete genomeFAD dependent oxidoreductase8e-1168.6
NC_003413:1666520:1669331166933116704671137Pyrococcus furiosus DSM 3638, complete genomesarcosine oxidase, subunit beta3e-1067
NC_015966:1661329:1685595168559516867851191Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomeFAD dependent oxidoreductase8e-1065.5
NC_008358:2574343:2594991259499125962201230Hyphomonas neptunium ATCC 15444, complete genomeputative oxidoreductase6e-0858.9
NC_008148:2498000:2507596250759625088371242Rubrobacter xylanophilus DSM 9941, complete genomeFAD dependent oxidoreductase6e-0858.9
NC_016024:1764516:1803638180363818048461209Candidatus Chloracidobacterium thermophilum B chromosome chromosomeglycine/D-amino acid oxidase1e-0758.2
NC_000868:318434:3212723212723224111140Pyrococcus abyssi GE5, complete genomesarcosine oxidase, subunit beta5e-0756.2
NC_015410:2698572:2701657270165727031351479Pseudomonas mendocina NK-01 chromosome, complete genomeoxidoreductase2e-0653.9
NC_009328:2378345:2400547240054724017731227Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeSoxB-like sarcosine oxidase subunit beta related3e-0653.5