Pre_GI: BLASTP Hits

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Query: NC_006511:3079512:3079512 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Start: 3079512, End: 3080597, Length: 1086

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011147:3075186:3075186307518630762711086Salmonella enterica subsp. enterica serovar Paratyphi A strmurein transglycosylase C0721
NC_016832:3100683:3100683310068331017681086Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Membrane-bound lytic murein transglycosylase C0721
NC_003198:3126548:3126548312654831276331086Salmonella enterica subsp. enterica serovar Typhi str. CT18,membrane-bound lytic murein transglycosylase C0721
NC_004631:3112043:3112043311204331131281086Salmonella enterica subsp. enterica serovar Typhi Ty2, completemembrane-bound lytic murein transglycosylase C0721
NC_011149:3187022:3187022318702231881071086Salmonella enterica subsp. enterica serovar Agona str. SL483,membrane-bound lytic murein transglycosylase C0720
NC_009792:4017510:4017510401751040185951086Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein0677
NC_008253:3122148:3122148312214831232301083Escherichia coli 536, complete genomemembrane-bound lytic murein transglycosylase C precursor0669
NC_020211:4484817:4486250448625044873261077Serratia marcescens WW4, complete genomemembrane-bound lytic murein transglycosylase C6e-163573
NC_016818:3851542:3856033385603338571121080Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completelytic murein transglycosylase3e-159561
NC_015061:3840463:3844310384431038453891080Rahnella sp. Y9602 chromosome, complete genomelytic transglycosylase catalytic6e-159560
NC_017047:3907854:3911701391170139127801080Rahnella aquatilis HX2 chromosome, complete genomemurein transglycosylase C5e-158557
NC_012962:3864000:3864463386446338655361074Photorhabdus asymbiotica, complete genomeMembrane-bound lytic murein transglycosylase C precursor4e-156551
NC_012779:261438:2762412762412773201080Edwardsiella ictaluri 93-146, complete genomemembrane-bound lytic murein transglycosylase C3e-155548
NC_013508:275081:2932152932152942941080Edwardsiella tarda EIB202, complete genomemurein transglycosylase C2e-155548
NC_014500:1066911:1096350109635010974321083Dickeya dadantii 3937 chromosome, complete genomemembrane-bound lytic murein transglycosylase C2e-154545
NC_013592:956829:9840999840999851811083Dickeya dadantii Ech586, complete genomeLytic transglycosylase catalytic3e-154544
NC_017160:945176:9465759465759476511077Yersinia pestis D182038 chromosome, complete genomemembrane-bound lytic murein transglycosylase C9e-150530
NC_017154:941065:9446029446029456781077Yersinia pestis D106004 chromosome, complete genomemembrane-bound lytic murein transglycosylase C9e-150530
NC_014029:1001000:1002457100245710035331077Yersinia pestis Z176003 chromosome, complete genomemembrane-bound lytic murein transglycosylase C9e-150530
NC_009708:986918:9883189883189893941077Yersinia pseudotuberculosis IP 31758 chromosome, complete genomemurein transglycosylase C9e-150530
NC_005810:3964468:3965868396586839669441077Yersinia pestis biovar Microtus str. 91001, complete genomemurein transglycosylase C9e-150530
NC_010159:138879:1589991589991600751077Yersinia pestis Angola, complete genomemembrane-bound lytic murein transglycosylase C (Murein hydrolase C)9e-150530
NC_010634:3692321:3711327371132737124031077Yersinia pseudotuberculosis PB1/+, complete genomelytic transglycosylase catalytic9e-150530
NC_017168:50391:5187551875529511077Yersinia pestis A1122 chromosome, complete genomemurein transglycosylase C9e-150530
NC_003143:1033500:1052311105231110533991089Yersinia pestis CO92, complete genomemembrane-bound lytic murein transglycosylase C7e-150530
NC_004088:3661601:3680389368038936814771089Yersinia pestis KIM, complete genomemembrane-bound lytic murein transglycosylase C7e-150530
NC_020418:1397112:1418300141830014194151116Morganella morganii subsp. morganii KT, complete genomeMembrane-bound lytic murein transglycosylase C precursor5e-150530
NC_017265:854492:8558928558928569801089Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,membrane-bound lytic murein transglycosylase C7e-150530
NC_009381:627685:6290846290846301721089Yersinia pestis Pestoides F chromosome, complete genomemurein transglycosylase C7e-150530
NC_010465:933488:9349069349069359941089Yersinia pseudotuberculosis YPIII, complete genomeLytic transglycosylase catalytic7e-150530
NC_008149:3529428:3548215354821535493031089Yersinia pestis Nepal516, complete genomemembrane-bound lytic murein transglycosylase C7e-150530
NC_008150:361224:3647433647433658311089Yersinia pestis Antiqua, complete genomemembrane-bound lytic murein transglycosylase C7e-150530
NC_006155:3779381:3798209379820937992971089Yersinia pseudotuberculosis IP 32953, complete genomemembrane-bound lytic murein transglycosylase C7e-150530
NC_010278:1918000:1937451193745119385481098Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,murein transglycosylase C1e-96353
NC_010939:1986263:2000747200074720018441098Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeMembrane-bound lytic murein transglycosylase C precursor1e-96353
NC_009053:1942973:1975864197586419769611098Actinobacillus pleuropneumoniae L20, complete genomeMembrane-bound lytic murein transglycosylase C precursor1e-96353
NC_009381:775357:805027805027805689663Yersinia pestis Pestoides F chromosome, complete genomemembrane-bound lytic murein transglycosylase4e-41168
NC_014228:1712339:175134817513481751923576Xenorhabdus nematophila ATCC 19061, complete genomelytic murein endotransglycosylase E, membrane-bound (fragment)4e-40165
NC_010694:2189652:219260221926022193195594Erwinia tasmaniensis, complete genomeMembrane-bound lytic murein transglycosylase E4e-36152
NC_002937:1578213:1603093160309316042291137Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completetransglycosylase, SLT family3e-35149
NC_009901:3317068:3330191333019133317501560Shewanella pealeana ATCC 700345, complete genomeLytic transglycosylase catalytic5e-35148
NC_016602:103878:1055331055331071191587Vibrio furnissii NCTC 11218 chromosome 1, complete sequencelytic transglycosylase3e-33142
NC_012440:1841315:1866417186641718676041188Persephonella marina EX-H1, complete genomemembrane-bound lytic murein transglycosylase C3e-33142
NC_014800:329861:3368183368183381161299Pseudoalteromonas sp. SM9913 chromosome chromosome II, completeputative transglycosylase4e-28125
NC_015160:2521849:2538245253824525396331389Odoribacter splanchnicus DSM 20712 chromosome, complete genomeextracellular solute-binding protein family 33e-1170.1
NC_017179:1197763:119776311977631198317555Clostridium difficile BI1, complete genometransglycosylase3e-1169.7
NC_013315:1187986:118798611879861188540555Clostridium difficile CD196 chromosome, complete genometransglycosylase3e-1169.7
NC_009089:1329826:132982613298261330380555Clostridium difficile 630, complete genomeputative transglycosylase3e-1169.7
NC_008593:2020473:203784220378422038495654Clostridium novyi NT, complete genomelytic murein transglycosylase, putative4e-1169.3
NC_015425:2277570:229041522904152291074660Clostridium botulinum BKT015925 chromosome, complete genomelytic murein transglycosylase6e-1168.6
NC_009483:5113729:512062851206285121383756Geobacter uraniireducens Rf4 chromosome, complete genomelytic transglycosylase6e-1168.6
NC_014219:1736000:175182117518211752510690Bacillus selenitireducens MLS10 chromosome, complete genomeLytic transglycosylase catalytic6e-1065.5
NC_019908:982471:989710989710990426717Brachyspira pilosicoli P43/6/78 chromosome, complete genomelytic transglycosylase2e-0963.9
NC_014330:2268773:228178822817882282501714Brachyspira pilosicoli 95/1000 chromosome, complete genomelytic transglycosylase2e-0963.9
NC_018607:1803500:180877418087741809490717Brachyspira pilosicoli B2904 chromosome, complete genomelytic transglycosylase2e-0963.5
NC_008261:2481500:249581124958112496356546Clostridium perfringens ATCC 13124, complete genometransglycosylase, SLT family2e-0963.5
NC_015572:1421782:143602314360231436871849Methylomonas methanica MC09 chromosome, complete genomelytic transglycosylase catalytic subunit4e-0962.8
NC_013173:1231213:123625212362521236854603Desulfomicrobium baculatum DSM 4028, complete genomeLytic transglycosylase catalytic5e-0962.4
NC_003366:2266757:228197822819782282523546Clostridium perfringens str. 13, complete genomehypothetical protein6e-0962.4
NC_008262:2150944:216507121650712165616546Clostridium perfringens SM101, complete genomesecreted protein1e-0861.2
NC_007644:1638083:164380416438041644424621Moorella thermoacetica ATCC 39073, complete genomeLytic transglycosylase, catalytic1e-0861.2
NC_012225:787737:794109794109794822714Brachyspira hyodysenteriae WA1, complete genomelytic transglycosylase1e-0861.2
NC_011891:4104000:412519141251914125820630Anaeromyxobacter dehalogenans 2CP-1, complete genomeLytic transglycosylase catalytic2e-0860.8
NC_007760:4055860:409261540926154093244630Anaeromyxobacter dehalogenans 2CP-C, complete genomeLytic transglycosylase, catalytic1e-0860.8
NC_009675:4281249:429915642991564299785630Anaeromyxobacter sp. Fw109-5 chromosome, complete genomelytic transglycosylase catalytic subunit2e-0860.5
NC_010125:381711:399853399853400524672Gluconacetobacter diazotrophicus PAl 5, complete genomeputative lytic transglycosylase2e-0860.5
NC_000964:2146000:2248350224835022552076858Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein2e-0860.5
NC_017243:1229597:124215712421571242882726Brachyspira intermedia PWS/A chromosome, complete genomelytic transglycosylase3e-0860.1
NC_010814:2217153:224462722446272245265639Geobacter lovleyi SZ, complete genomeLytic transglycosylase catalytic2e-0860.1
NC_011660:1889504:189604518960451896713669Listeria monocytogenes HCC23 chromosome, complete genometransglycosylase2e-0860.1
NC_009012:3224000:323867632386763239362687Clostridium thermocellum ATCC 27405, complete genomeLytic transglycosylase, catalytic3e-0859.7
NC_008686:1472899:147489714748971475661765Paracoccus denitrificans PD1222 chromosome 1, complete sequenceLytic transglycosylase, catalytic3e-0859.7
NC_016627:793583:793583793583794260678Clostridium clariflavum DSM 19732 chromosome, complete genomelytic murein transglycosylase3e-0859.7
NC_014150:446359:453240453240453983744Brachyspira murdochii DSM 12563 chromosome, complete genomeLytic transglycosylase catalytic3e-0859.7
NC_018604:1045774:105879510587951059511717Brachyspira pilosicoli WesB complete genomelytic transglycosylase4e-0859.3
NC_017179:281069:299909299909300577669Clostridium difficile BI1, complete genometransglycosylase5e-0858.9
NC_013891:640784:657261657261657935675Listeria seeligeri serovar 1/2b str. SLCC3954, complete genometransglycosylase, SLT family5e-0858.9
NC_014311:1888686:189788118978811898510630Ralstonia solanacearum PSI07 chromosome, complete genometransglycosylase5e-0858.9
NC_007759:1571425:157745515774551578108654Syntrophus aciditrophicus SB, complete genomesoluble lytic murein transglycosylase6e-0858.5
NC_008555:696217:712724712724713407684Listeria welshimeri serovar 6b str. SLCC5334, complete genometransglycosylase, SLT family7e-0858.5
NC_016012:236012:256637256637257188552Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeSlt family transglycosylase9e-0858.2
NC_012914:1824955:182495518249551825521567Paenibacillus sp. JDR-2, complete genomeLytic transglycosylase catalytic1e-0757.8
NC_013939:1625491:163130116313011632002702Deferribacter desulfuricans SSM1, complete genomehypothetical protein2e-0757.4
NC_004757:2412161:241216124121612413066906Nitrosomonas europaea ATCC 19718, complete genomeSLT domain1e-0757.4
NC_009633:2137999:2137999213799921397591761Alkaliphilus metalliredigens QYMF chromosome, complete genomelytic transglycosylase catalytic subunit3e-0756.6
NC_011662:1160887:118477911847791185693915Thauera sp. MZ1T, complete genomeLytic transglycosylase catalytic5e-0755.8
NC_009439:3770282:3770282377028237717481467Pseudomonas mendocina ymp, complete genomelytic transglycosylase, catalytic6e-0755.5
NC_009483:2854500:287564628756462876242597Geobacter uraniireducens Rf4 chromosome, complete genomelytic transglycosylase8e-0755.1
NC_013523:959625:9807889807889830282241Sphaerobacter thermophilus DSM 20745 chromosome 1, complete genomeLytic transglycosylase catalytic7e-0755.1
NC_020126:5849483:5854845585484558570492205Myxococcus stipitatus DSM 14675, complete genomeglutamine ABC transporter substrate-binding protein9e-0754.7
NC_011772:1575674:159336415933641594149786Bacillus cereus G9842, complete genometransglycosylase, SLT family2e-0653.9
NC_011901:1122357:1138977113897711403951419Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completetransglycosylase2e-0653.9
NC_014834:959986:959986959986960753768Rhodopseudomonas palustris DX-1 chromosome, complete genomelytic transglycosylase2e-0653.9
NC_013173:1356526:137746913774691377996528Desulfomicrobium baculatum DSM 4028, complete genomeLytic transglycosylase catalytic2e-0653.5
NC_014972:137184:158025158025158633609Desulfobulbus propionicus DSM 2032 chromosome, complete genomelytic transglycosylase catalytic2e-0653.5
NC_007925:3933765:395291039529103953635726Rhodopseudomonas palustris BisB18, complete genomeLytic transglycosylase, catalytic4e-0652.8
NC_009092:4337617:435105243510524351783732Shewanella loihica PV-4, complete genomeLytic transglycosylase, catalytic4e-0652.8
NC_014121:3627588:3644135364413536459041770Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein4e-0652.8
NC_012779:610509:6105096105096124371929Edwardsiella ictaluri 93-146, complete genomesoluble lytic murein transglycosylase8e-0651.6
NC_021182:2059143:208183620818362082390555Clostridium pasteurianum BC1, complete genomesoluble lytic murein transglycosylase-like protein9e-0651.6