Pre_GI: BLASTP Hits

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Query: NC_006511:2677964:2699408 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Start: 2699408, End: 2701108, Length: 1701

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013892:992811:1014091101409110157371647Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein0736
NC_012583:242760:2464762464762481071632Vibrio cholerae O395 chromosome chromosome II, complete sequencehypothetical protein3e-97356
NC_009456:998935:1012862101286210144931632Vibrio cholerae O395 chromosome 1, complete sequencehypothetical protein3e-97356
NC_009654:615504:6301926301926312861095Marinomonas sp. MWYL1, complete genomehypothetical protein2e-44181
NC_004129:2034500:2046050204605020472221173Pseudomonas fluorescens Pf-5, complete genomehypothetical protein5e-43176
NC_008751:1736512:1747426174742617485051080Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeGp5 domain protein9e-42172
NC_011883:303980:3061613061613072431083Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,Gp5 domain protein7e-37155
NC_016602:2586044:259959525995952600284690Vibrio furnissii NCTC 11218 chromosome 1, complete sequencehypothetical protein2e-31137
NC_008751:1736512:174849017484901749176687Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomehypothetical protein6e-30132
NC_007005:5825925:583441858344185834795378Pseudomonas syringae pv. syringae B728a, complete genomeunnamed protein product; similar to bacteriophage protein9e-26119
NC_011883:303980:305475305475306176702Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,hypothetical protein3e-25117
NC_009654:615504:631277631277631969693Marinomonas sp. MWYL1, complete genomehypothetical protein6e-24112
NC_016602:2586044:259890925989092599520612Vibrio furnissii NCTC 11218 chromosome 1, complete sequencehypothetical protein6e-23109
NC_007005:5825925:583382458338245834417594Pseudomonas syringae pv. syringae B728a, complete genomeconserved hypothetical bacteriophage protein3e-1377
NC_008027:5533311:554180755418075542115309Pseudomonas entomophila L48, complete genomehypothetical protein3e-0860.8