Pre_GI: BLASTP Hits

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Query: NC_006511:2677964:2690452 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Start: 2690452, End: 2691312, Length: 861

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003198:4453457:44737534473753450773033978Salmonella enterica subsp. enterica serovar Typhi str. CT18,3e-172604
NC_009328:2161116:217781121778112178653843Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeadenine-specific DNA methyltransferase5e-29128
NC_015873:1119500:112745011274501128292843Megasphaera elsdenii DSM 20460, complete genomeadenine-specific DNA methyltransferase1e-24113
NC_012846:986877:102308310230831023868786Bartonella grahamii as4aup, complete genomeadenine-specific DNA methyltransferase2e-0860.1
NC_012846:986877:102167210216721022487816Bartonella grahamii as4aup, complete genomeadenine-specific DNA methyltransferase2e-0860.1
NC_011742:2823000:282628628262862827203918Escherichia coli S88 chromosome, complete genomeadenine-specific DNA-methyltransferase2e-135481
NC_013665:1591081:162267616226761623614939Methanocella paludicola SANAE, complete genomeadenine-specific methyltransferase2e-26120
NC_017986:4124335:413120141312014131971771Pseudomonas putida ND6 chromosome, complete genomeD12 class N6 adenine-specific DNA methyltransferase9e-0754.3
NC_015733:1976752:198370119837011984471771Pseudomonas putida S16 chromosome, complete genomeD12 class N6 adenine-specific DNA methyltransferase2e-0756.6
NC_020209:3262000:327234632723463273140795Pseudomonas poae RE*1-1-14, complete genomeD12 class N6 adenine-specific DNA methyltransferase2e-0963.2
NC_013956:3525711:354035335403533541147795Pantoea ananatis LMG 20103 chromosome, complete genomeDam6e-82304
NC_016857:2871689:288363128836312884488858Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74DNA adenine methylase4e-134477
NC_014125:766576:793582793582794400819Legionella pneumophila 2300/99 Alcoy chromosome, complete genomeDNA adenine methylase6e-54211
NC_013205:576583:599138599138599956819Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,DNA adenine methylase2e-48192
NC_017167:2298962:233298323329832333840858Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1DNA adenine methylase1e-39163
NC_009437:685214:702936702936703808873Caldicellulosiruptor saccharolyticus DSM 8903, complete genomeDNA adenine methylase6e-31134
NC_015216:652266:667337667337668245909Methanobacterium sp. AL-21 chromosome, complete genomeDNA adenine methylase9e-28124
NC_015437:697051:7041617041617052281068Selenomonas sputigena ATCC 35185 chromosome, complete genomeDNA adenine methylase1e-22107
NC_009051:1455183:147118414711841472035852Methanoculleus marisnigri JR1, complete genomeDNA adenine methylase5e-2098.2
NC_007948:3541987:354798935479893548813825Polaromonas sp. JS666, complete genomeDNA adenine methylase2e-1686.7
NC_007963:1582089:158968915896891590450762Chromohalobacter salexigens DSM 3043, complete genomeDNA adenine methylase1e-0654.3
NC_003198:4453457:450222945022294503089861Salmonella enterica subsp. enterica serovar Typhi str. CT18,DNA adenine methylase4e-171600
NC_017046:2869873:288237328823732883230858Salmonella enterica subsp. enterica serovar Typhimurium str. 798DNA adenine methylase4e-134477
NC_010634:2124185:212759721275972128415819Yersinia pseudotuberculosis PB1/+, complete genomeDNA adenine methylase1e-74279
NC_013205:1123280:118453211845321185350819Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,DNA adenine methylase4e-49194
NC_017167:1648913:172520017252001726039840Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1DNA adenine methylase2e-43176
NC_015573:2463123:247378724737872474626840Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeDNA adenine methylase5e-31134
NC_014751:946155:968124968124968900777Mycoplasma leachii PG50 chromosome, complete genomeDNA adenine methylase2e-29129
NC_009659:3815966:3825792382579238276961905Janthinobacterium sp. Marseille chromosome, complete genomeDNA adenine methylase1e-26120
NC_014963:4091910:411297341129734113785813Terriglobus saanensis SP1PR4 chromosome, complete genomeDNA adenine methylase3e-26119
NC_015656:2795784:280235528023552803233879Frankia symbiont of Datisca glomerata chromosome, complete genomeDNA adenine methylase9e-25114
NC_010085:1358772:136632213663221367164843Nitrosopumilus maritimus SCM1, complete genomeDNA adenine methylase9e-23107
NC_007908:1946902:195719019571901958011822Rhodoferax ferrireducens T118, complete genomeDNA adenine methylase3e-2099.4
NC_014033:1152994:117025111702511171177927Prevotella ruminicola 23 chromosome, complete genomeDNA adenine methylase3e-1892.8
NC_015311:1101761:111468411146841115541858Prevotella denticola F0289 chromosome, complete genomeDNA adenine methylase1e-1687.4
NC_009767:2866668:288354828835482884492945Roseiflexus castenholzii DSM 13941, complete genomeDNA adenine methylase3e-1479.3
NC_015381:1202061:121846112184611219246786Burkholderia gladioli BSR3 chromosome 1, complete sequenceDNA adenine methylase8e-0651.2
NC_011147:2676972:268598826859882686848861Salmonella enterica subsp. enterica serovar Paratyphi A strDNA adenine methylase4e-171600
NC_020260:312805:322401322401323261861Cronobacter sakazakii Sp291, complete genomeDNA adenine methylase1e-132472
NC_014306:1244721:125156412515641252418855Erwinia billingiae Eb661, complete genomeDNA adenine methylase2e-90332
NC_015574:1676798:167679816767981677739942Methanobacterium sp. SWAN-1 chromosome, complete genomeDNA adenine methylase8e-27120
NC_013192:2381901:2396751239675123981871437Leptotrichia buccalis DSM 1135, complete genomeDNA adenine methylase2e-25116
NC_010175:1603500:160460416046041605482879Chloroflexus aurantiacus J-10-fl, complete genomeDNA adenine methylase3e-23109
NC_012778:1819559:183398418339841834817834Eubacterium eligens ATCC 27750, complete genomeDNA adenine methylase5e-21102
NC_007948:3502843:350924035092403510055816Polaromonas sp. JS666, complete genomeDNA adenine methylase7e-1994.7
NC_015510:2907815:292062329206232921420798Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeDNA adenine methylase3e-1789
NC_015501:938196:946578946578947486909Porphyromonas asaccharolytica DSM 20707 chromosome, completeDNA adenine methylase1e-1480.5
NC_015381:2109500:211653721165372117322786Burkholderia gladioli BSR3 chromosome 1, complete sequenceDNA adenine methylase8e-0754.7
NC_011601:846358:858598858598859455858Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeDNA adenine methylase6e-136483
NC_016810:2871689:288363128836312884488858Salmonella enterica subsp. enterica serovar Typhimurium strDNA adenine methylase4e-134477
NC_009494:775676:807543807543808361819Legionella pneumophila str. Corby chromosome, complete genomeDNA adenine methylase6e-54211
NC_007974:2048000:207887020788702079667798Ralstonia metallidurans CH34 chromosome 2, complete sequenceDNA adenine methylase4e-47188
NC_009012:2927793:294181129418112942653843Clostridium thermocellum ATCC 27405, complete genomeDNA adenine methylase1e-32140
NC_007517:3524715:3535829353582935377451917Geobacter metallireducens GS-15, complete genomeDNA adenine methylase3e-28125
NC_017045:1:114901149012416927Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,DNA adenine methylase6e-26117
NC_012032:1602812:160576016057601606638879Chloroflexus sp. Y-400-fl, complete genomeDNA adenine methylase3e-23109
NC_007963:1552761:156348015634801564292813Chromohalobacter salexigens DSM 3043, complete genomeDNA adenine methylase1e-21103
NC_014931:4490526:449619444961944497003810Variovorax paradoxus EPS chromosome, complete genomeDNA adenine methylase8e-2097.8
NC_009943:940835:949994949994950749756Candidatus Desulfococcus oleovorans Hxd3, complete genomeDNA adenine methylase2e-1789.7
NC_014910:3727887:374454637445463745481936Alicycliphilus denitrificans BC chromosome, complete genomeDNA adenine methylase2e-1273.2
NC_012779:3016327:301769130176913018449759Edwardsiella ictaluri 93-146, complete genomeDNA adenine methylase8e-0857.8
NC_018870:484000:501570501570502397828Thermacetogenium phaeum DSM 12270 chromosome, complete genomeDNA adenine methylase Dam6e-26117
NC_019904:1616742:162405716240571624908852Echinicola vietnamensis DSM 17526 chromosome, complete genomeDNA adenine methylase Dam3e-1892.4
NC_017095:1757935:175994617599461760926981Fervidobacterium pennivorans DSM 9078 chromosome, complete genomeDNA adenine methylase Dam3e-30132
NC_013165:2240377:227190822719082272825918Slackia heliotrinireducens DSM 20476, complete genomeDNA adenine methylase Dam2e-1686.3
NC_004578:3817330:383004238300423830836795Pseudomonas syringae pv. tomato str. DC3000, complete genomeDNA adenine methylase, putative8e-0961.2
NC_003197:2870268:287268828726882873545858Salmonella typhimurium LT2, complete genomeDNA adenine methylase-like protein4e-132470
NC_016860:2896254:289625428962542897111858Salmonella enterica subsp. enterica serovar Typhimurium strDNA adenine methylase-like protein4e-132470
NC_015381:3457784:347117134711713471956786Burkholderia gladioli BSR3 chromosome 1, complete sequencegp275e-0755.1
NC_012724:3070386:308106930810693081809741Burkholderia glumae BGR1 chromosome 1, complete genomegp272e-0653.1
NC_007434:1809946:181917118191711819959789Burkholderia pseudomallei 1710b chromosome I, complete sequencegp278e-0754.7
NC_015381:3091500:311175631117563112541786Burkholderia gladioli BSR3 chromosome 1, complete sequencegp271e-0653.9
NC_020418:3022891:303872430387243039533810Morganella morganii subsp. morganii KT, complete genomehypothetical protein3e-61235
NC_012125:894955:923358923358924191834Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein2e-63242
NC_007356:1165760:1174814117481411759291116Dehalococcoides sp. CBDB1, complete genomemethyltransferase1e-0860.5
NC_002927:3827211:383460238346023835393792Bordetella bronchiseptica RB50, complete genomemodification methylase4e-1065.5
NC_010673:479552:490263490263491081819Borrelia hermsii DAH, complete genomemodification methylase LlaDCHIA5e-28125
NC_011295:1263500:127563212756321276579948Coprothermobacter proteolyticus DSM 5265, complete genomemodification methylase MjaIII (Adenine-specificmethyltransferase MjaIII) (M.MjaIII)4e-28125
NC_010793:1922000:192615419261541926963810Orientia tsutsugamushi str. Ikeda, complete genomeN6 adenine-specific DNA-methyltransferase4e-1375.5
NC_011147:2713937:271768527176852718497813Salmonella enterica subsp. enterica serovar Paratyphi A strphage protein5e-64244
NC_016830:4999946:501431450143145015108795Pseudomonas fluorescens F113 chromosome, complete genomeprophage adenine modification methytransferase1e-0964.3
NC_015856:1152021:117670911767091177263555Collimonas fungivorans Ter331 chromosome, complete genomeprophage PSPPH02 adenine modification methytransferase2e-0860.1
NC_005773:2177184:219452521945252195319795Pseudomonas syringae pv. phaseolicola 1448A, complete genomeprophage PSPPH02, putative adenine modification methytransferase2e-0963.2
NC_005773:2177184:218385621838562184650795Pseudomonas syringae pv. phaseolicola 1448A, complete genomeprophage PSPPH02, putative adenine modification methytransferase4e-0962
NC_005773:5636606:565239656523965653190795Pseudomonas syringae pv. phaseolicola 1448A, complete genomeprophage PSPPH06, putative adenine modification methytransferase1e-0963.9
NC_004557:363628:380624380624381466843Clostridium tetani E88, complete genomeputative adenine-specific DNA methyltransferase5e-31135
NC_011244:497212:505022505022505846825Borrelia recurrentis A1, complete genomeputative adenine-specific DNA methyltransferase2e-27122
NC_007613:761234:765949765949766497549Shigella boydii Sb227, complete genomeputative DNA adenine methylase1e-81303
NC_014306:103545:110666110666111157492Erwinia billingiae Eb661, complete genomePutative DNA adenine methylase4e-50198
NC_007712:2028500:203029720302972030989693Sodalis glossinidius str. 'morsitans', complete genomeputative DNA adenine methylase6e-46184
NC_006155:2208686:221133022113302212148819Yersinia pseudotuberculosis IP 32953, complete genomeputative DNA adenine methylase1e-75283
NC_012962:4942000:496180649618064962285480Photorhabdus asymbiotica, complete genomeputative DNA adenine methylase3e-26119
NC_013450:854790:855889855889856452564Staphylococcus aureus subsp. aureus ED98, complete genomeputative methylase1e-1170.5
NC_007493:207932:223468223468224274807Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequencePutative N-6 adenine-specific DNA methylase4e-0755.5
NC_006511:2718401:272214927221492722961813Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative phage gene5e-64244
NC_010546:4923496:101041010411072969Cyanothece sp. ATCC 51142 chromosome circular, complete sequenceputative site-specific DNA-methyltransferase1e-1170.5
NC_007681:153476:167844167844168782939Methanosphaera stadtmanae DSM 3091, complete genomeputative type II restriction-modification system, adenine-specific DNA methyltransferase3e-26119
NC_011205:2938356:295087429508742951731858Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853retron adenine methylase1e-136485
NC_011080:2870428:287302028730202873853834Salmonella enterica subsp. enterica serovar Newport str. SL254,retron EC67 DNA adenine methylase6e-75280
NC_011149:2802199:281568228156822816539858Salmonella enterica subsp. enterica serovar Agona str. SL483,retron EC67 DNA adenine methylase6e-132470
NC_019842:1172944:118561811856181186442825Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,Site-specific DNA methylase6e-0858.5
NC_008497:32160:4830348303493281026Lactobacillus brevis ATCC 367, complete genomeSite-specific DNA methylase1e-29130
NC_010544:262000:283999283999284811813Candidatus Phytoplasma australiense, complete genomeSite-specific DNA methylase9e-1270.9