Pre_GI: BLASTP Hits

Some Help

Query: NC_006511:2677964:2679379 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Start: 2679379, End: 2680443, Length: 1065

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003198:4453457:44737534473753450773033978Salmonella enterica subsp. enterica serovar Typhi str. CT18,0677
NC_003198:4453457:4491144449114444922081065Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative major capsid protein0663
NC_017046:2869873:2871088287108828721701083Salmonella enterica subsp. enterica serovar Typhimurium str. 798major capsid protein0642
NC_016857:2871689:2872346287234628734281083Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74major capsid-like protein0642
NC_016810:2871689:2872346287234628734281083Salmonella enterica subsp. enterica serovar Typhimurium strputative major capsid protein0642
NC_011149:2802199:2804323280432328053841062Salmonella enterica subsp. enterica serovar Agona str. SL483,phage major capsid protein, P2 family3e-177620
NC_011205:2938356:2939570293957029406281059Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853phage major capsid protein, P2 family2e-167588
NC_007613:761234:7761987761987772561059Shigella boydii Sb227, complete genomemajor capsid protein5e-164577
NC_016845:1773416:1788534178853417895921059Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,minor capsid protein H1 and H2, major capsid protein N*2e-162572
NC_014306:1244721:1260841126084112619021062Erwinia billingiae Eb661, complete genomemajor capsid protein6e-160563
NC_014837:3766426:3769083376908337701441062Pantoea sp. At-9b chromosome, complete genomephage major capsid protein, P2 family2e-133476
NC_012962:4942000:4952422495242249535371116Photorhabdus asymbiotica, complete genomemajor capsid protein3e-127455
NC_010694:614985:6402176402176413861170Erwinia tasmaniensis, complete genomePutative major capsid protein3e-125448
NC_013956:3525711:3526942352694235281621221Pantoea ananatis LMG 20103 chromosome, complete genomeN5e-124444
NC_020260:312805:3321643321643333121149Cronobacter sakazakii Sp291, complete genomemajor capsid protein4e-121434
NC_015061:1598920:1619756161975616208201065Rahnella sp. Y9602 chromosome, complete genomephage major capsid protein, P2 family1e-116419
NC_017047:4037674:4056717405671740577811065Rahnella aquatilis HX2 chromosome, complete genomephage major capsid protein, P2 family2e-116418
NC_020181:5182568:5182568518256851836351068Enterobacter aerogenes EA1509E, complete genomePhage major capsid protein3e-114411
NC_020211:4598217:4600372460037246015831212Serratia marcescens WW4, complete genomephage major capsid protein3e-114411
NC_012917:3565268:3589444358944435905711128Pectobacterium carotovorum subsp. carotovorum PC1, complete genomephage major capsid protein, P2 family4e-112404
NC_013282:3389619:3391867339186733929551089Cronobacter turicensis, complete genomeCapsid proteins5e-109394
NC_009648:3803622:3821804382180438228621059Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative prophage major capsid protein1e-108393
NC_017047:1551836:1570330157033015714301101Rahnella aquatilis HX2 chromosome, complete genomephage major capsid protein, P2 family6e-103374
NC_016818:1605918:1623578162357816246781101Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completephage major capsid protein, P2 family8e-103374
NC_012724:147454:1492801492801502931014Burkholderia glumae BGR1 chromosome 1, complete genomeGp2, phage major capsid protein, P2 family protein7e-102370
NC_020209:3262000:3277183327718332781901008Pseudomonas poae RE*1-1-14, complete genomeputative phage capsid-like protein2e-101369
NC_014323:992978:9936979936979947401044Herbaspirillum seropedicae SmR1 chromosome, complete genomemajor capsid [Bacteriophage phi CTX] protein2e-99362
NC_014562:2871765:2874224287422428752251002Pantoea vagans C9-1 chromosome, complete genomeCapsid proteins precursor1e-98360
NC_007963:1582089:1584712158471215857311020Chromohalobacter salexigens DSM 3043, complete genomephage major capsid protein, P27e-96350
NC_015856:1152021:1169436116943611704431008Collimonas fungivorans Ter331 chromosome, complete genomemajor capsid protein1e-94346
NC_010943:325739:3257393257393267551017Stenotrophomonas maltophilia K279a, complete genomeputative capsid proteins precursor (gpn) [contains: minor capsid protein h1; minor capsid protein h2; major capsid protein n*]3e-88325
NC_012724:1892000:1906688190668819077251038Burkholderia glumae BGR1 chromosome 1, complete genomeP2 family phage major capsid protein3e-86318
NC_003902:3514000:3532850353285035338661017Xanthomonas campestris pv. campestris str. ATCC 33913, completephage-related major capsid protein3e-84311
NC_012660:1737423:173976217397621740658897Pseudomonas fluorescens SBW25 chromosome, complete genomeputative phage capsid-like protein2e-82306
NC_014306:103545:1222531222531233021050Erwinia billingiae Eb661, complete genomeMajor phage capsid protein3e-79295
NC_008800:1870596:1871335187133518723811047Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,major phage capsid protein2e-78293
NC_017059:3688688:3691370369137036924071038Rhodospirillum photometricum DSM 122, complete genomePhage major capsid protein, P2 family5e-73275
NC_005773:5636606:563832556383255639164840Pseudomonas syringae pv. phaseolicola 1448A, complete genomeprophage PSPPH06, major capsid protein, P2 family1e-50200
NC_009656:5185704:5203018520301852040401023Pseudomonas aeruginosa PA7 chromosome, complete genomeP2 family phage major capsid protein3e-50199
NC_005085:659378:676561676561677541981Chromobacterium violaceum ATCC 12472, complete genomeprobable major capsid protein of prophage P22e-44179
NC_014562:1698253:171299517129951713387393Pantoea vagans C9-1 chromosome, complete genomeCapsid proteins precursor2e-43176
NC_008751:1762562:1763299176329917643241026Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomephage major capsid protein, P2 family5e-43175
NC_008751:3214000:3214791321479132158161026Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomephage major capsid protein, P2 family5e-43175
NC_011883:269497:2895652895652905991035Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,phage major capsid protein, P2 family9e-41167
NC_008750:3314309:3325044332504433260871044Shewanella sp. W3-18-1, complete genomephage major capsid protein, P2 family3e-28125
NC_009348:4135002:413751541375154138480966Aeromonas salmonicida subsp. salmonicida A449, complete genomePhage major capsid protein, P22e-25116
NC_012125:894955:9306939306939317151023Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein9e-24111
NC_013892:992811:99951599951510005461032Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein2e-23110
NC_014500:894136:9303699303699314451077Dickeya dadantii 3937 chromosome, complete genomehypothetical protein2e-23110
NC_013592:804288:8311148311148321451032Dickeya dadantii Ech586, complete genomephage major capsid protein, P2 family5e-23108
CP002797:2472908:2476906247690624779101005Escherichia coli NA114, complete genomePhage major capsid protein4e-1995.9
NC_011083:2542876:2560452256045225614561005Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,major capsid protein2e-1893.6
NC_014121:1101093:111163011116301112295666Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completemajor capsid protein2e-1686.7
NC_015224:3291736:3310516331051633115171002Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,Major capsid protein3e-1583.2
NC_015224:2095816:209925920992592099465207Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,Major capsid protein5e-1582
NC_009778:2951207:2971685297168529726861002Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein3e-1376.3