Pre_GI: BLASTP Hits

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Query: NC_006511:2677964:2677964 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Start: 2677964, End: 2678167, Length: 204

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020260:312805:334535334535334738204Cronobacter sakazakii Sp291, complete genomephage tail protein1e-33141
NC_003198:4453457:448972944897294489932204Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative phage tail protein1e-33141
NC_010694:614985:642593642593642796204Erwinia tasmaniensis, complete genomePutative phage tail protein5e-33139
NC_011149:2802199:280290828029082803111204Salmonella enterica subsp. enterica serovar Agona str. SL483,phage Tail Protein X5e-33139
NC_016845:1773416:179080617908061791009204Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein1e-28125
NC_014562:2871765:287327228732722873475204Pantoea vagans C9-1 chromosome, complete genomeTail protein X (GpX)7e-28122
NC_014837:3766426:376766337676633767866204Pantoea sp. At-9b chromosome, complete genometail X family protein2e-27121
NC_014306:1244721:126312712631271263330204Erwinia billingiae Eb661, complete genomephage tail protein2e-27120
NC_007613:761234:778470778470778673204Shigella boydii Sb227, complete genomeprobable phage tail protein3e-27120
NC_014228:3022903:304225630422563042459204Xenorhabdus nematophila ATCC 19061, complete genomeTail protein X (GpX)1e-21101
NC_016818:1605918:162602016260201626223204Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeP2-like prophage tail protein X2e-1994.4
NC_017047:1551836:157276915727691572972204Rahnella aquatilis HX2 chromosome, complete genomeTail protein X (GpX)2e-1994.4
NC_013282:3389619:339032433903243390527204Cronobacter turicensis, complete genomeTail protein X8e-1992.4
NC_012724:1892000:190903019090301909236207Burkholderia glumae BGR1 chromosome 1, complete genomePhage tail protein2e-1890.9
NC_015061:1598920:162205416220541622257204Rahnella sp. Y9602 chromosome, complete genometail X family protein2e-1890.9
NC_015856:1152021:117174911717491171958210Collimonas fungivorans Ter331 chromosome, complete genomeputative phage tail protein3e-1890.1
NC_017047:4037674:405901840590184059221204Rahnella aquatilis HX2 chromosome, complete genometail X family protein3e-1890.1
NC_020211:4598217:459892545989254599128204Serratia marcescens WW4, complete genomephage Tail Protein X5e-1889.7
NC_020209:3262000:327978032797803279986207Pseudomonas poae RE*1-1-14, complete genomephage P2 tail gpX-like protein2e-1787.8
NC_014306:103545:124892124892125095204Erwinia billingiae Eb661, complete genomePhage tail protein X1e-1685.1
NC_003902:3514000:353515535351553535364210Xanthomonas campestris pv. campestris str. ATCC 33913, completephage-related tail protein4e-1683.2
NC_009648:3803622:382025138202513820454204Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative prophage tail component protein1e-1581.6
NC_014722:193500:195782195782196054273Burkholderia rhizoxinica HKI 454, complete genometail protein X7e-1579.3
NC_012724:147454:147812147812148018207Burkholderia glumae BGR1 chromosome 1, complete genomePhage tail protein2e-1374.7
NC_007604:743738:747510747510747722213Synechococcus elongatus PCC 7942, complete genomehypothetical protein6e-1372.8
NC_006576:856014:873149873149873361213Synechococcus elongatus PCC 6301, complete genomehypothetical protein6e-1372.8
NC_002978:549454:552599552599552808210Wolbachia endosymbiont of Drosophila melanogaster, complete genomeprophage P2W3, tail protein X, putative2e-1270.9
NC_010981:1371265:141200614120061412215210Wolbachia pipientis, complete genomephage tail protein GpX2e-1270.9
NC_010981:468465:482144482144482353210Wolbachia pipientis, complete genomePhage tail protein GpX4e-1270.1
NC_012416:753500:756980756980757186207Wolbachia sp. wRi, complete genometail protein X, putative4e-1270.1
NC_012962:4942000:495097349509734951215243Photorhabdus asymbiotica, complete genomeprobable phage tail protein1e-0962
NC_008390:2018201:203705720370572037263207Burkholderia cepacia AMMD chromosome 1, complete sequencephage tail X family protein1e-0858.2
NC_012881:2310141:232532323253232325526204Desulfovibrio salexigens DSM 2638, complete genometail X family protein4e-0856.6
NC_015381:3457784:347451634745163474722207Burkholderia gladioli BSR3 chromosome 1, complete sequencePhage tail X family protein6e-0856.2
NC_015381:2109500:211340021134002113606207Burkholderia gladioli BSR3 chromosome 1, complete sequencePhage tail X family protein8e-0855.8
NC_012560:3303961:330997833099783310172195Azotobacter vinelandii DJ, complete genomePhage tail X protein1e-0755.1
NC_021150:3303959:330997633099763310170195Azotobacter vinelandii CA6, complete genomePhage tail X protein1e-0755.1
NC_012724:3070386:308474130847413084947207Burkholderia glumae BGR1 chromosome 1, complete genomePhage tail X family protein1e-0755.1
NC_015381:3091500:311547331154733115679207Burkholderia gladioli BSR3 chromosome 1, complete sequencePhage tail X family protein2e-0754.3
NC_007963:1582089:158324315832431583365123Chromohalobacter salexigens DSM 3043, complete genomeputative bacteriophage protein5e-0753.1
NC_017033:1089579:109366110936611093867207Frateuria aurantia DSM 6220 chromosome, complete genomeP2-like prophage tail protein X6e-0753.1
NC_017059:3688688:369362936936293693838210Rhodospirillum photometricum DSM 122, complete genomehypothetical protein2e-0651.2