Pre_GI: BLASTP Hits

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Query: NC_006511:2501500:2520128 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Start: 2520128, End: 2520421, Length: 294

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011147:2496808:251566425156642515957294Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein8e-40162
NC_013850:1887556:189811518981151898396282Klebsiella variicola At-22 chromosome, complete genomehypothetical protein3e-2097.1
NC_011083:374000:383946383946384182237Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein6e-0649.7