Pre_GI: BLASTP Hits

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Query: NC_006511:1770000:1790786 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Start: 1790786, End: 1791181, Length: 396

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012125:2646792:266773926677392668134396Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein1e-70264
NC_011147:1763681:178596917859691786364396Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein1e-70264
NC_010102:1979742:200051320005132000908396Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein7e-70261
NC_009436:1679265:169295016929501693345396Enterobacter sp. 638, complete genomehypothetical protein7e-46182
NC_020063:2785652:279057927905792790980402Enterobacteriaceae bacterium strain FGI 57, complete genomehypothetical protein2e-45180
NC_020064:2299950:231746823174682317875408Serratia marcescens FGI94, complete genomehypothetical protein1e-2098.2
NC_008687:256692:268564268564268971408Paracoccus denitrificans PD1222 chromosome 2, complete sequenceprotein of unknown function DUF13117e-1785.9
NC_010515:1428664:143418614341861434602417Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceprotein of unknown function DUF13111e-1478.2
NC_016835:1:182511825118622372Rahnella aquatilis CIP 78.65 = ATCC 33071 plasmid pRahaq201,hypothetical protein3e-0857
NC_004578:5916711:592807159280715928466396Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein3e-0753.9
NC_004578:5916711:593202959320295932424396Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein4e-0753.5
NC_004757:2657490:266802326680232668475453Nitrosomonas europaea ATCC 19718, complete genomeputative periplasmic protein6e-0752.8