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Query: NC_006511:1654959:1670915 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Start: 1670915, End: 1671328, Length: 414

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011147:1650142:166609816660981666511414Salmonella enterica subsp. enterica serovar Paratyphi A strpertussis-like toxin subunit7e-77285
NC_003198:1771432:178827417882741788687414Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative pertussis-like toxin subunit1e-75281
NC_004631:1182883:119244511924451192858414Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative pertussis-like toxin subunit1e-75281
NC_015761:1181186:119198911919891192396408Salmonella bongori NCTC 12419, complete genomepertussis-like toxin subunit2e-62237
NC_010067:2304313:231678823167882317243456Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-44178
NC_005810:515744:525941525941526366426Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein6e-27119
NC_008149:3790897:380029338002933800718426Yersinia pestis Nepal516, complete genomehypothetical protein6e-27119
NC_010465:4222586:422923242292324229657426Yersinia pseudotuberculosis YPIII, complete genomehypothetical protein6e-27119
NC_006155:456000:466490466490466915426Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein6e-27119
NC_009708:4215500:422531642253164225741426Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein6e-27119
NC_014029:331919:341301341301341726426Yersinia pestis Z176003 chromosome, complete genomehypothetical protein6e-27119
NC_017154:331921:341304341304341729426Yersinia pestis D106004 chromosome, complete genomehypothetical protein6e-27119
NC_017168:751078:760474760474760899426Yersinia pestis A1122 chromosome, complete genomesubtilase cytotoxin subunit B-like protein6e-27119
NC_017265:644384:651610651610652035426Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein6e-27119
NC_011147:1239904:125300312530031253362360Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein5e-0959.7
NC_006511:1243817:125909412590941259519426Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical periplasmic protein6e-0959.7