Pre_GI: BLASTP Hits

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Query: NC_006511:1654959:1669436 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Start: 1669436, End: 1669978, Length: 543

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011147:1650142:166461916646191665161543Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein2e-104377
NC_011094:1282385:129329912932991293841543Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein2e-104377
NC_003198:1771432:178679517867951787337543Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein2e-104377
NC_004631:1182883:119379511937951194337543Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein2e-104377
NC_015761:1181186:119333711933371193879543Salmonella bongori NCTC 12419, complete genomehypothetical protein5e-98356
NC_011294:1465500:148074114807411481286546Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein7e-71266
NC_014838:218000:238235238235238777543Pantoea sp. At-9b plasmid pPAT9B01, complete sequencehypothetical protein7e-70262
NC_012779:1939747:194513119451311945682552Edwardsiella ictaluri 93-146, complete genomehypothetical protein8e-70262
NC_012779:2184927:219429221942922194843552Edwardsiella ictaluri 93-146, complete genomehypothetical protein2e-69261
NC_016612:4119410:412713341271334127675543Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein2e-68258
NC_010067:2304313:231537923153792315849471Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-67254
NC_016612:2223357:223598822359882236521534Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein5e-52203
NC_016832:1182496:119303111930311193309279Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein4e-49193
NC_015381:1202061:121704112170411217598558Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein1e-44178
NC_014722:1084616:109935810993581099897540Burkholderia rhizoxinica HKI 454, complete genomeSECRETION ACTIVATOR PROTEIN3e-44177
NC_015381:3091500:311332831133283113894567Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein1e-38159
NC_015381:2109500:211518421151842115750567Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein1e-38159
NC_015381:3457784:347237234723723472938567Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein2e-38158
NC_012724:3070386:308259730825973083163567Burkholderia glumae BGR1 chromosome 1, complete genomehypothetical protein1e-38158
NC_008750:3314309:331956733195673320115549Shewanella sp. W3-18-1, complete genomeprotein of unknown function DUF8472e-34144
NC_014972:2798670:280349428034942804039546Desulfobulbus propionicus DSM 2032 chromosome, complete genomehypothetical protein4e-1994.4
NC_017513:997716:100122110012211001724504Neisseria meningitidis G2136 chromosome, complete genomehypothetical protein3e-1684.7
NC_017505:1013311:103050310305031031006504Neisseria meningitidis alpha710 chromosome, complete genomehypothetical protein4e-1684
NC_009256:1282793:128654712865471287035489Burkholderia vietnamiensis G4 chromosome 1, complete sequencehypothetical protein3e-1271.6
NC_010002:1833923:184446118444611844937477Delftia acidovorans SPH-1, complete genomeprotein of unknown function DUF8471e-1065.9
NC_011894:672270:672270672270672914645Methylobacterium nodulans ORS 2060, complete genomeprotein of unknown function DUF8472e-1065.5
NC_016078:715005:730014730014730763750Pelagibacterium halotolerans B2 chromosome, complete genomehypothetical protein3e-1064.3
NC_010625:670482:693001693001693483483Burkholderia phymatum STM815 plasmid pBPHY01, complete sequenceprotein of unknown function DUF8471e-0962.4
NC_017059:3688688:369412236941223694712591Rhodospirillum photometricum DSM 122, complete genomehypothetical protein2e-0962.4
NC_010169:957565:971060971060971818759Brucella suis ATCC 23445 chromosome I, complete sequenceprotein of unknown function DUF8473e-0961.6
NC_010103:936250:949746949746950504759Brucella canis ATCC 23365 chromosome I, complete sequenceprotein of unknown function DUF8473e-0961.6
NC_016778:96792:102840102840103598759Brucella canis HSK A52141 chromosome 1, complete sequencesecretion activating protein3e-0961.6
NC_003317:1030220:103626910362691037027759Brucella melitensis 16M chromosome I, complete sequenceSECRETION ACTIVATOR PROTEIN3e-0961.6
NC_012441:956609:970092970092970850759Brucella melitensis ATCC 23457 chromosome I, complete sequencehypothetical protein3e-0961.2
NC_017244:956554:970036970036970794759Brucella melitensis M28 chromosome chromosome 1, complete sequencehypothetical protein3e-0961.2
NC_017246:956868:970349970349971107759Brucella melitensis M5-90 chromosome chromosome I, completehypothetical protein3e-0961.2
NC_017248:953131:966481966481967239759Brucella melitensis NI chromosome chromosome I, complete sequencehypothetical protein3e-0961.2
NC_016795:1441024:144707214470721447830759Brucella abortus A13334 chromosome 1, complete sequencesecretion activator protein5e-0960.8
NC_006932:956805:970297970297971055759Brucella abortus biovar 1 str. 9-941 chromosome I, completesecretion activator protein, hypothetical5e-0960.8
NC_010742:955104:968596968596969354759Brucella abortus S19 chromosome 1, complete sequenceSecretion activator protein5e-0960.8
NC_014228:3282500:329194032919403292452513Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein2e-0755.1
NC_008044:857759:867997867997868806810Silicibacter sp. TM1040, complete genomeprotein of unknown function DUF8478e-0650.1
NC_008044:1736000:175296217529621753771810Silicibacter sp. TM1040, complete genomeprotein of unknown function DUF8478e-0650.1
NC_002678:6608697:661686866168686617719852Mesorhizobium loti MAFF303099, complete genomehypothetical protein1e-0549.7