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Query: NC_006511:1654959:1664778 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Start: 1664778, End: 1664906, Length: 129

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:1182496:119786411978641197992129Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein3e-1890.5
NC_011147:1650142:165996116599611660089129Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein3e-1890.5
NC_004631:1182883:119889211988921199020129Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein3e-1890.5
NC_003198:1771432:178211217821121782240129Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein3e-1890.5
NC_011083:1323827:133678613367861336914129Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein6e-1372.8
NC_011080:1321268:133353413335341333662129Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein6e-1372.8
NC_016831:1083871:109476710947671094895129Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein6e-1372.8
NC_011094:1282385:129839512983951298523129Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein6e-1372.8
NC_011205:2024458:203510720351072035235129Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein8e-1372.4
NC_011149:1870931:188159418815941881722129Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein1e-1272
NC_010102:1779707:179037617903761790483108Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein6e-0856.2
NC_016856:1326503:134171813417181341825108Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein9e-0855.5
NC_010067:1655815:166637116663711666568198Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein9e-0752.4