Pre_GI: BLASTP Hits

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Query: NC_006511:1654959:1662431 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Start: 1662431, End: 1662628, Length: 198

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012125:2531817:253996325399632540307345Salmonella enterica subsp. enterica serovar Paratyphi C strainlysozyme inhibitor7e-32135
NC_011094:1282385:130069713006971301041345Salmonella enterica subsp. enterica serovar Schwarzengrund strlysozyme inhibitor8e-32135
NC_003197:1320861:133404513340451334389345Salmonella typhimurium LT2, complete genomeputative periplasmic protein7e-32135
NC_011080:1321268:133582113358211336165345Salmonella enterica subsp. enterica serovar Newport str. SL254,putative periplasmic protein7e-32135
NC_011083:1323827:133908713390871339431345Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative periplasmic protein7e-32135
NC_010102:1779707:178785217878521788196345Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein7e-32135
NC_011205:2024458:203260420326042032948345Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853lysozyme inhibitor7e-32135
NC_011294:1896168:190431319043131904657345Salmonella enterica subsp. enterica serovar Enteritidis strlysozyme inhibitor7e-32135
NC_016810:1276340:129089812908981291242345Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein7e-32135
NC_016831:1083871:109705410970541097398345Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein7e-32135
NC_006905:1342474:136566413656641366008345Salmonella enterica subsp. enterica serovar Choleraesuis strputative periplasmic protein7e-32135
NC_011149:1870931:187907618790761879420345Salmonella enterica subsp. enterica serovar Agona str. SL483,putative periplasmic protein7e-32135
NC_017046:1277787:129097112909711291315345Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein7e-32135
NC_016863:1277652:129221012922101292554345Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1lysozyme inhibitor7e-32135
NC_016860:1317174:133173213317321332076345Salmonella enterica subsp. enterica serovar Typhimurium strlysozyme inhibitor7e-32135
NC_016857:1276340:129089812908981291242345Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74lysozyme inhibitor7e-32135
NC_016856:1326503:134402013440201344364345Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Slysozyme inhibitor7e-32135
NC_011274:1928939:193708419370841937428345Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91lysozyme inhibitor2e-31134
NC_016832:1182496:120016112001611200505345Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Lysozyme inhibitor2e-31134
NC_003198:1771432:177960217796021779943342Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative secreted protein2e-31134
NC_004631:1182883:120118912011891201530342Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative secreted protein2e-31134
NC_011147:1650142:165761416576141657811198Salmonella enterica subsp. enterica serovar Paratyphi A str3e-31133
NC_015761:1181186:121235412123541212695342Salmonella bongori NCTC 12419, complete genomehypothetical protein1e-30131
NC_010067:1655815:166400116640011664345345Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-29126