Pre_GI: BLASTP Hits

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Query: NC_006511:1654959:1661501 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Start: 1661501, End: 1662463, Length: 963

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011149:1870931:1876099187609918771421044Salmonella enterica subsp. enterica serovar Agona str. SL483,putative cytoplasmic protein3e-178624
NC_012125:2531817:2536987253698725380301044Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein1e-177622
NC_011083:1323827:1341364134136413424071044Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative cytoplasmic protein1e-177622
NC_011147:1650142:165668416566841657601918Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein2e-177621
NC_011080:1321268:1338099133809913391421044Salmonella enterica subsp. enterica serovar Newport str. SL254,putative cytoplasmic protein5e-177620
NC_011294:1896168:1901336190133619023791044Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein4e-177620
NC_011274:1928939:1934107193410719351501044Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein3e-177620
NC_003197:1320861:1336322133632213373651044Salmonella typhimurium LT2, complete genomeputative cytoplasmic protein1e-176619
NC_016810:1276340:1293175129317512942181044Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein1e-176619
NC_016856:1326503:1346297134629713473401044Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative cytoplasmic protein1e-176619
NC_016857:1276340:1293175129317512942181044Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative cytoplasmic protein1e-176619
NC_016860:1317174:1334009133400913350521044Salmonella enterica subsp. enterica serovar Typhimurium strputative cytoplasmic protein1e-176619
NC_016863:1277652:1294487129448712955301044Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein1e-176619
NC_017046:1277787:1293248129324812942911044Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein1e-176619
NC_006905:1342474:1367941136794113689841044Salmonella enterica subsp. enterica serovar Choleraesuis strputative cytoplasmic protein2e-176617
NC_011094:1282385:1302987130298713040301044Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein7e-176616
NC_004631:1182883:1203467120346712045101044Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein2e-175614
NC_016832:1182496:1202439120243912034821044Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,BNR/Asp-box repeat domain protein2e-175614
NC_003198:1771432:1776622177662217776651044Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein8e-175612
NC_010102:1779707:1784875178487517859181044Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein7e-174609
NC_010067:1655815:1661024166102416620671044Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-160565
NC_011205:2024458:202962620296262030372747Salmonella enterica subsp. enterica serovar Dublin str. CT_020218533e-138491
NC_010676:304405:3174813174813185811101Burkholderia phytofirmans PsJN chromosome 2, complete sequencehypothetical protein6e-35148
NC_017267:3333036:3356650335665033577531104Xanthomonas oryzae pv. oryzicola BLS256 chromosome, completeBNR-Asp-box repeat domain protein1e-33143
NC_010688:1435694:1435694143569414367611068Xanthomonas campestris pv. campestris, complete genomeexported exo-alpha-sialidase4e-32139
NC_007086:1457531:1457531145753114585981068Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein3e-32139
NC_015177:391774:4119984119984131491152Pedobacter saltans DSM 12145 chromosome, complete genomeexported exo-alpha-sialidase2e-31136
NC_009879:556000:5597075597075607981092Rickettsia canadensis str. McKiel, complete genomehypothetical protein6e-23108
NC_011205:2024458:203041020304102030670261Salmonella enterica subsp. enterica serovar Dublin str. CT_020218532e-21103
NC_014500:4049384:4072119407211940732941176Dickeya dadantii 3937 chromosome, complete genomeexpressed protein2e-1687
NC_020291:4305521:4311484431148443126801197Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeputative neuraminidase2e-1480.5
NC_009655:2148433:2160615216061521618021188Actinobacillus succinogenes 130Z chromosome, complete genomeglycosyl hydrolase BNR repeat-containing glycosyl hydrolase2e-1377
NC_007109:401500:410278410278410706429Rickettsia felis URRWXCal2, complete genomehypothetical protein3e-0962.8