Some Help

Query: NC_006511:1579776:1590790 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Start: 1590790, End: 1591722, Length: 933

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011147:1573470:158597115859711586903933Salmonella enterica subsp. enterica serovar Paratyphi A strouter membrane protein0635
NC_016832:1269018:127453312745331275492960Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,SfpA (Systemic factor protein A)-like protein0634
NC_011083:1408202:141216214121621413121960Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative outer membrane protein0634
NC_003198:1693623:170461117046111705570960Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative outer membrane protein0634
NC_004631:1271500:127556012755601276519960Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative outer membrane protein0634
NC_011294:1810285:182126018212601822219960Salmonella enterica subsp. enterica serovar Enteritidis strouter membrane protein1e-180632
NC_011274:1850086:186107118610711862030960Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein1e-180632
NC_011205:1938574:194954919495491950508960Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853outer membrane protein1e-180632
NC_010102:1703172:171415817141581715117960Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-180632
NC_003197:1401603:140711814071181408077960Salmonella typhimurium LT2, complete genomeputative outer membrane protein1e-180632
NC_016810:1358456:136397113639711364930960Salmonella enterica subsp. enterica serovar Typhimurium strputative outer membrane protein1e-180632
NC_016831:1166868:117238211723821173341960Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative outer membrane protein1e-180632
NC_017046:1358531:136404613640461365005960Salmonella enterica subsp. enterica serovar Typhimurium str. 798outer membrane protein1e-180632
NC_016863:1359769:136528413652841366243960Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative outer membrane protein1e-180632
NC_016860:1399290:140480514048051405764960Salmonella enterica subsp. enterica serovar Typhimurium strputative outer membrane protein1e-180632
NC_016857:1358456:136397113639711364930960Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative outer membrane protein1e-180632
NC_016856:1411579:141709414170941418053960Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative outer membrane protein1e-180632
NC_013941:975353:994919994919995878960Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein3e-135481
NC_011601:717072:737820737820738779960Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeSfpA (systemic factor protein A)-like protein4e-135481
NC_003902:4111283:4111283411128341123441062Xanthomonas campestris pv. campestris str. ATCC 33913, completehypothetical protein3e-0756.2
NC_013223:1188500:1204599120459912056601062Desulfohalobium retbaense DSM 5692, complete genomeProtein of unknown function DUF22197e-0755.1