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Query: NC_006511:1579776:1590306 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Start: 1590306, End: 1590620, Length: 315

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:1269018:127563512756351275949315Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,DNA/RNA non-specific endonuclease5e-47186
NC_011147:1573470:158548715854871585801315Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein5e-47186
NC_004631:1271500:127666212766621276976315Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein5e-47186
NC_003198:1693623:170415417041541704468315Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein5e-47186
NC_010102:1703172:171370117137011714015315Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-46182
NC_011083:1408202:141326314132631413577315Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein2e-45180
NC_003197:1401603:140822014082201408534315Salmonella typhimurium LT2, complete genomeputative inner membrane protein4e-42169
NC_016810:1358456:136507313650731365387315Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein4e-42169
NC_016856:1411579:141819614181961418510315Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative inner membrane protein4e-42169
NC_016857:1358456:136507313650731365387315Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative inner membrane protein4e-42169
NC_016860:1399290:140590714059071406221315Salmonella enterica subsp. enterica serovar Typhimurium strputative inner membrane protein4e-42169
NC_016863:1359769:136638613663861366700315Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative inner membrane protein4e-42169
NC_017046:1358531:136514813651481365462315Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein4e-42169
NC_011205:1938574:194915819491581949406249Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein1e-39161
NC_016831:1166868:117348411734841173732249Salmonella enterica subsp. enterica serovar Gallinarum/pullorumImp5e-39159