Pre_GI: BLASTP Hits

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Query: NC_006511:1579776:1583871 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Start: 1583871, End: 1584068, Length: 198

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017046:1358531:137168513716851371897213Salmonella enterica subsp. enterica serovar Typhimurium str. 79850S ribosomal protein L356e-1785.9
NC_010102:1703172:170726717072671707464198Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein7e-1785.9
NC_007613:1353500:135350413535041353701198Shigella boydii Sb227, complete genome50S ribosomal subunit protein A7e-1785.9
NC_004631:1271500:128321512832151283412198Salmonella enterica subsp. enterica serovar Typhi Ty2, complete50S ribosomal protein L357e-1785.9
NC_003197:1401603:141477214147721414969198Salmonella typhimurium LT2, complete genome50S ribosomal protein L357e-1785.9
NC_020063:2011019:202502720250272025224198Enterobacteriaceae bacterium strain FGI 57, complete genomeLSU ribosomal protein L35P7e-1785.9
NC_011083:1408202:141981514198151420012198Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,ribosomal protein L357e-1785.9
NC_013850:2103469:214267121426712142868198Klebsiella variicola At-22 chromosome, complete genomeribosomal protein L357e-1785.9
NC_010658:1772994:179153417915341791731198Shigella boydii CDC 3083-94, complete genomeribosomal protein L357e-1785.9
NC_003198:1693623:169771816977181697915198Salmonella enterica subsp. enterica serovar Typhi str. CT18,50S ribosomal protein L357e-1785.9
NC_011205:1938574:194266919426691942866198Salmonella enterica subsp. enterica serovar Dublin str. CT_0202185350S ribosomal protein L357e-1785.9
NC_011274:1850086:185418118541811854378198Salmonella enterica subsp. enterica serovar Gallinarum str. 287/9150S ribosomal protein L357e-1785.9
NC_016857:1358456:137161013716101371822213Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/7450S ribosomal protein L356e-1785.9
NC_016863:1359769:137293813729381373135198Salmonella enterica subsp. enterica serovar Typhimurium str. UK-150S ribosomal protein L357e-1785.9
NC_016860:1399290:141245914124591412656198Salmonella enterica subsp. enterica serovar Typhimurium str50S ribosomal protein L357e-1785.9
NC_016856:1411579:142474814247481424945198Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S50S ribosomal protein L357e-1785.9
NC_016832:1269018:128218812821881282385198Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,50S ribosomal subunit protein A7e-1785.9
NC_016831:1166868:118003411800341180231198Salmonella enterica subsp. enterica serovar Gallinarum/pullorum50S ribosomal subunit protein L357e-1785.9
NC_016810:1358456:137162513716251371822198Salmonella enterica subsp. enterica serovar Typhimurium str50S ribosomal protein L357e-1785.9
NC_011294:1810285:181438018143801814577198Salmonella enterica subsp. enterica serovar Enteritidis str50S ribosomal protein L357e-1785.9
NC_011283:2185462:220926222092622209459198Klebsiella pneumoniae 342 chromosome, complete genome50S ribosomal protein L357e-1785.9
NC_012912:2216749:223572522357252235922198Dickeya zeae Ech1591, complete genomeribosomal protein L352e-1684.7
NC_014228:1712339:175503917550391755236198Xenorhabdus nematophila ATCC 19061, complete genome50S ribosomal subunit protein A2e-1684.3
NC_012880:2425330:243053424305342430731198Dickeya dadantii Ech703, complete genomeribosomal protein L352e-1684.3
NC_014500:2589089:259329725932972593494198Dickeya dadantii 3937 chromosome, complete genome50S ribosomal subunit protein L354e-1683.6