Pre_GI: BLASTP Hits

Some Help

Query: NC_006511:1273162:1293374 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Start: 1293374, End: 1293937, Length: 564

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017046:1709578:170957817095781710141564Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein2e-108390
NC_016857:1709695:170969517096951710258564Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein2e-108390
NC_016810:1709695:170969517096951710258564Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-108390
NC_011147:1267005:128721712872171287780564Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein2e-108390
NC_011094:1726000:172602217260221726585564Salmonella enterica subsp. enterica serovar Schwarzengrund strSmr protein/MutS22e-108390
NC_011149:1429523:144972514497251450288564Salmonella enterica subsp. enterica serovar Agona str. SL483,smr domain protein2e-108390
NC_006905:1766000:176600817660081766571564Salmonella enterica subsp. enterica serovar Choleraesuis strputative Smr domain4e-108390
NC_004631:1623511:162351116235111624074564Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein6e-108389
NC_003198:1336894:135710813571081357671564Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein6e-108389
NC_015761:1630000:164515516451551645718564Salmonella bongori NCTC 12419, complete genomehypothetical protein2e-104377
CP002185:1493280:149451814945181495081564Escherichia coli W, complete genomeconserved hypothetical protein4e-95346
NC_009792:1345500:136625713662571366820564Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein5e-95346
NC_012947:2366000:239067223906722391235564Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeSmr protein/MutS21e-94345
NC_012759:1296000:129606212960621296625564Escherichia coli BW2952 chromosome, complete genomehypothetical protein1e-94345
AC_000091:1407693:140769314076931408256564Escherichia coli W3110 DNA, complete genomehypothetical protein1e-94345
NC_000913:1404000:140400314040031404566564Escherichia coli K12, complete genomehypothetical protein1e-94345
NC_012880:2480000:248157424815742482140567Dickeya dadantii Ech703, complete genomeSmr protein/MutS26e-63239
NC_020064:3609844:364961136496113650183573Serratia marcescens FGI94, complete genomehypothetical protein4e-58223
NC_015559:3645181:364940836494083649983576Marinomonas posidonica IVIA-Po-181 chromosome, complete genomeSmr protein/MutS21e-27122
NC_015424:3520783:356808935680893568670582Aeromonas veronii B565 chromosome, complete genomeSmr domain-containing protein1e-25116
NC_012560:2348202:237502423750242375584561Azotobacter vinelandii DJ, complete genomemutS-related protein2e-1995.5
NC_021150:2348214:237503623750362375596561Azotobacter vinelandii CA6, complete genomemutS-related protein2e-1995.5
NC_016830:4999946:500661050066105007224615Pseudomonas fluorescens F113 chromosome, complete genomeSmr domain protein2e-1788.6
NC_014931:5088125:511899751189975119680684Variovorax paradoxus EPS chromosome, complete genomeSmr protein/MutS23e-1581.3
NC_009074:2914053:293852129385212939258738Burkholderia pseudomallei 668 chromosome I, complete sequenceSmr domain protein6e-1477
NC_013446:4281250:430003543000354300691657Comamonas testosteroni CNB-2, complete genomeSmr protein/MutS21e-1272.8
NC_008344:811386:812483812483812941459Nitrosomonas eutropha C91, complete genomeSmr protein/MutS21e-1272.8
NC_003295:2507850:254245025424502543115666Ralstonia solanacearum GMI1000, complete genomehypothetical protein4e-1271.2
NC_014307:1131241:113190911319091132574666Ralstonia solanacearum CFBP2957 chromosome, complete genomehypothetical protein9e-1269.7
NC_020409:393329:428881428881429609729Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeSmr protein/MutS22e-1168.6
NC_017030:6297351:631033263103326311036705Corallococcus coralloides DSM 2259 chromosome, complete genomeSmr domain-containing protein1e-1066.2
NC_008554:484267:504331504331505092762Syntrophobacter fumaroxidans MPOB, complete genomeSmr protein/MutS29e-0960.1
NC_017513:997716:100407510040751004680606Neisseria meningitidis G2136 chromosome, complete genomeSmr domain protein4e-0858.2
NC_008044:3024125:302412530241253024727603Silicibacter sp. TM1040, complete genomeSmr protein/MutS25e-0753.9