Pre_GI: BLASTP Hits

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Query: NC_006511:1273162:1287551 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Start: 1287551, End: 1288237, Length: 687

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011147:1267005:128139412813941282080687Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein3e-131467
NC_011094:1726000:173171517317151732401687Salmonella enterica subsp. enterica serovar Schwarzengrund strB3/4 domain-containing protein3e-129460
NC_004631:1623511:162920416292041629890687Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein2e-128457
NC_003198:1336894:135129213512921351978687Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein2e-128457
NC_011149:1429523:144391314439131444599687Salmonella enterica subsp. enterica serovar Agona str. SL483,B3/4 domain protein4e-128457
NC_011080:1750000:175489017548901755576687Salmonella enterica subsp. enterica serovar Newport str. SL254,B3/4 domain protein7e-128456
NC_006905:1766000:177169817716981772384687Salmonella enterica subsp. enterica serovar Choleraesuis strputative cytoplasmic protein3e-127454
NC_003197:1753663:175853517585351759221687Salmonella typhimurium LT2, complete genomeputative cytoplasmic protein3e-127454
NC_016810:1709695:171538817153881716074687Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein3e-127454
NC_016856:1763640:176851217685121769198687Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative cytoplasmic protein3e-127454
NC_016857:1709695:171538817153881716074687Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative cytoplasmic protein3e-127454
NC_016860:1752000:175622617562261756912687Salmonella enterica subsp. enterica serovar Typhimurium strputative cytoplasmic protein3e-127454
NC_016863:1711832:171670417167041717390687Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein3e-127454
NC_017046:1709578:171528017152801715957678Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein1e-125448
NC_016816:4129299:415512641551264155905780Pantoea ananatis LMG 5342, complete genomeCro/CI family transcriptional regulator5e-91333
NC_020064:79422:969369693697631696Serratia marcescens FGI94, complete genomehypothetical protein6e-90330
NC_020063:3690308:373571537357153736410696Enterobacteriaceae bacterium strain FGI 57, complete genomehypothetical protein4e-88324
NC_014121:4577324:458137945813794582065687Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeB3/4 domain-containing protein2e-84311
NC_016830:3230939:323881332388133239508696Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein1e-83309
NC_015379:3736500:375363737536373754332696Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein1e-83309
NC_019973:5989816:600628960062896007008720Mesorhizobium australicum WSM2073, complete genomehypothetical protein2e-62238
NC_014923:6060859:607733260773326078051720Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeB3/4 domain protein2e-62238
NC_015675:6615245:663200066320006632719720Mesorhizobium opportunistum WSM2075 chromosome, complete genomeB3/4 domain-containing protein2e-62238
NC_016512:2322598:232947323294732330213741Propionibacterium acnes TypeIA2 P.acn17 chromosome, completeB3/4 domain-containing protein2e-36152
NC_016511:2321999:233013123301312330871741Propionibacterium acnes TypeIA2 P.acn31 chromosome, completeB3/4 domain-containing protein2e-36152
NC_014039:2320307:232719323271932327933741Propionibacterium acnes SK137 chromosome, complete genomeB3/4 domain protein2e-36152
NC_016516:2314115:232098923209892321729741Propionibacterium acnes TypeIA2 P.acn33 chromosome, completeB3/4 domain-containing protein2e-35149
NC_006085:2384892:239177623917762392516741Propionibacterium acnes KPA171202, complete genomehypothetical protein1e-35149
NC_020210:661236:665707665707666417711Geobacillus sp. GHH01, complete genomeputative phenylalanyl-tRNA synthetase7e-26117
NC_016593:762216:782816782816783526711Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeSolo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta8e-25113
NC_014363:427393:428295428295429017723Olsenella uli DSM 7084 chromosome, complete genomeB3/4 domain protein1e-23109
NC_010002:3357752:337671633767163377441726Delftia acidovorans SPH-1, complete genomehypothetical protein2e-1582.4
NC_017243:599814:619961619961620665705Brachyspira intermedia PWS/A chromosome, complete genomehypothetical protein1e-1170.1
NC_009699:1122000:114397211439721144670699Clostridium botulinum F str. Langeland chromosome, complete genomeB3/4 domain-containing protein4e-1065.1