Pre_GI: BLASTP Hits

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Query: NC_006511:1273162:1285595 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Start: 1285595, End: 1286422, Length: 828

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011147:1267005:127943812794381280265828Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein1e-162572
NC_004631:1623511:163101816310181631851834Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein2e-151534
NC_003198:1336894:134933113493311350164834Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein2e-151534
NC_006905:1766000:177351317735131774343831Salmonella enterica subsp. enterica serovar Choleraesuis strputative outer membrane or exported1e-149529
NC_011149:1429523:144196214419621442786825Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein2e-149528
NC_016860:1752000:175804017580401758864825Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-149528
NC_017046:1709578:171708517170851717909825Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein2e-149528
NC_003197:1753663:176034917603491761179831Salmonella typhimurium LT2, complete genomehypothetical protein2e-149528
NC_016810:1709695:171720217172021718032831Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-149528
NC_016856:1763640:177032617703261771156831Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein2e-149528
NC_016857:1709695:171720217172021718032831Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative outer membrane or exported protein2e-149528
NC_016863:1711832:171851817185181719348831Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein2e-149528
NC_011094:1726000:173352517335251734349825Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein2e-73276
NC_011080:1750000:175670117567011757525825Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein5e-73274