Pre_GI: BLASTP Hits

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Query: NC_006511:1273162:1279570 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Start: 1279570, End: 1279806, Length: 237

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011147:1267005:127341312734131273649237Salmonella enterica subsp. enterica serovar Paratyphi A strlipoprotein7e-32135
NC_011094:1726000:174014017401401740376237Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein3e-31133
NC_003198:1336894:134330413433041343540237Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative lipoprotein4e-31133
NC_004631:1623511:163764216376421637878237Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative lipoprotein4e-31133
NC_006905:1766000:178009617800961780350255Salmonella enterica subsp. enterica serovar Choleraesuis strputative outer membrane lipoprotein4e-31133
NC_016860:1752000:176465817646581764894237Salmonella enterica subsp. enterica serovar Typhimurium strputative outer membrane lipoprotein9e-31132
NC_016856:1763640:177694517769451777181237Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative outer membrane lipoprotein9e-31132
NC_003197:1753663:176696717669671767221255Salmonella typhimurium LT2, complete genomeputative outer membrane lipoprotein1e-30131
NC_016810:1709695:172382117238211724075255Salmonella enterica subsp. enterica serovar Typhimurium strputative lipoprotein1e-30131
NC_016857:1709695:172382117238211724075255Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative outer membrane lipoprotein1e-30131
NC_016863:1711832:172513717251371725391255Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative outer membrane lipoprotein1e-30131
NC_011149:1429523:143600714360071436168162Salmonella enterica subsp. enterica serovar Agona str. SL483,putative outer membrane lipoprotein7e-2199.4
NC_011080:1750000:176332017633201763481162Salmonella enterica subsp. enterica serovar Newport str. SL254,putative outer membrane lipoprotein7e-2199.4
NC_017046:1709578:172370417237041723865162Salmonella enterica subsp. enterica serovar Typhimurium str. 798lipoprotein1e-2098.2