Pre_GI: BLASTP Hits

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Query: NC_006510:3321426:3321860 Geobacillus kaustophilus HTA426, complete genome

Start: 3321860, End: 3322357, Length: 498

Host Lineage: Geobacillus kaustophilus; Geobacillus; Bacillaceae; Bacillales; Firmicutes; Bacteria

General Information: Geobacillus kaustophilus strain HTA426 was first isolated from deep sea sediment of the Mariana Trench in the Pacific Ocean and belongs to a closely related group of thermophilic Bacillus spp. Members of this genus were originally classified as Bacillus. Recent rDNA analysis and DNA-DNA hybridization studies using spore-forming thermophilic subsurface isolates provided enough evidence to define the phylogenetically distinct, physiologically and morphologically consistent taxon Geobacillus. Geobacillus species are chemo-organotrophic, obligately thermophilic, motile, spore-forming, aerobic or facultatively anaerobic. This organism was compared with mesophilic Bacillus spp. to identify genome characteristics and specific genes related to thermophilia. Analysis of the amino acid compositions showed clear differences between Geobacillus kaustophilus and the mesophilic bacilli. In addition, the higher G+C content in Geobacillus kaustophilus rRNA also appears correlated to thermophilia. In addition, tRNA modification by the Geobacillus kaustophilus specific tRNA methyltransferases probably aids in the thermoadaptation of this organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012793:3243727:325708732570873257584498Geobacillus sp. WCH70, complete genomeErfK/YbiS/YcfS/YnhG family protein1e-91335
NC_020210:3341976:334737533473753347872498Geobacillus sp. GHH01, complete genomeputative L,D-transpeptidase Ldt2e-86317
NC_000964:1474451:147581914758191476313495Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein5e-52203
NC_019896:2579036:259286725928672593370504Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeSpore protein YkuD4e-51199
NC_021171:1661923:166412816641281664484357Bacillus sp. 1NLA3E, complete genomeErfK/YbiS/YcfS/YnhG family protein5e-33140
NC_021182:1188000:119687011968701197244375Clostridium pasteurianum BC1, complete genomehypothetical protein9e-27119
NC_010424:1563033:159458615945861595509924Candidatus Desulforudis audaxviator MP104C, complete genomeErfK/YbiS/YcfS/YnhG family protein2e-1788.2
NC_015565:2027279:207794920779492078833885Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeErfK/YbiS/YcfS/YnhG family protein3e-1787.8
NC_015589:2878000:289307328930732893954882Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeErfK/YbiS/YcfS/YnhG family protein4e-1580.5
NC_002971:1523065:152555015255501526494945Coxiella burnetii RSA 493, complete genomeLysM domain protein4e-1580.5
NC_012918:4648220:4661097466109746623261230Geobacter sp. M21 chromosome, complete genomeErfK/YbiS/YcfS/YnhG family protein3e-1477.8
NC_013411:284461:317145317145317651507Geobacillus sp. Y412MC61, complete genomeErfK/YbiS/YcfS/YnhG family protein8e-1476.3
NC_013791:2839516:284500328450032845497495Bacillus pseudofirmus OF4 chromosome, complete genomeUncharacterized erfK/srfK family protein, probably secreted9e-1475.9
NC_011146:4505821:4525715452571545269441230Geobacter bemidjiensis Bem, complete genomeErfK/YbiS/YcfS/YnhG family protein3e-1374.3
NC_008254:3246306:3260010326001032614821473Mesorhizobium sp. BNC1, complete genomeErfK/YbiS/YcfS/YnhG1e-1272.8
NC_007777:75885:947449474495439696Frankia sp. CcI3, complete genomeErfK/YbiS/YcfS/YnhG1e-1272.8
NC_008536:2717891:273476727347672735720954Solibacter usitatus Ellin6076, complete genomeErfK/YbiS/YcfS/YnhG family protein3e-1270.9
NC_014923:1680095:1680095168009516816001506Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeErfK/YbiS/YcfS/YnhG family protein7e-1269.7
NC_002678:2739829:2764101276410127656181518Mesorhizobium loti MAFF303099, complete genomehypothetical protein1e-1168.9
NC_009667:1076718:1079542107954210810081467Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequenceErfK/YbiS/YcfS/YnhG family protein1e-1168.9
NC_015675:1721543:1721543172154317230601518Mesorhizobium opportunistum WSM2075 chromosome, complete genomeErfK/YbiS/YcfS/YnhG family protein2e-1168.6
NC_019973:1731626:1731626173162617331971572Mesorhizobium australicum WSM2073, complete genomehypothetical protein2e-1168.6
NC_015857:1809500:1828886182888618303191434Brucella pinnipedialis B2/94 chromosome chromosome 1, completeErfK/YbiS/YcfS/YnhG family protein5e-1167
NC_003317:190975:194810194810195670861Brucella melitensis 16M chromosome I, complete sequencePROTEIN ERFK/SRFK5e-1167
NC_010742:1794000:1813271181327118147041434Brucella abortus S19 chromosome 1, complete sequenceErfK/YbiS/YcfS/YnhG5e-1167
NC_007618:1792500:1812111181211118133371227Brucella melitensis biovar Abortus 2308 chromosome I, completeErfK/YbiS/YcfS/YnhG6e-1166.6
NC_006932:1795500:1814983181498318162091227Brucella abortus biovar 1 str. 9-941 chromosome I, completehypothetical protein6e-1166.6
NC_010103:1777000:1796300179630017975261227Brucella canis ATCC 23365 chromosome I, complete sequenceATP synthase subunits region ORF 56e-1166.6
NC_004310:1777721:1798125179812517993511227Brucella suis 1330 chromosome I, complete sequencehypothetical protein6e-1166.6
NC_010169:1599936:1614082161408216153081227Brucella suis ATCC 23445 chromosome I, complete sequenceATP synthase subunits region ORF 59e-1166.2
NC_009483:2489000:2517302251730225186211320Geobacter uraniireducens Rf4 chromosome, complete genomeErfK/YbiS/YcfS/YnhG family protein4e-1063.9
NC_008319:1574908:157605115760511576644594Synechococcus sp. CC9311, complete genomeATP synthase5e-1063.9
NC_011894:200928:204335204335205126792Methylobacterium nodulans ORS 2060, complete genomeErfK/YbiS/YcfS/YnhG family protein5e-1063.5
NC_007484:755058:775264775264776262999Nitrosococcus oceani ATCC 19707, complete genomehypothetical protein8e-1062.8
NC_011901:1860887:1859616185961618608901275Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completehypothetical protein9e-1062.8
NC_012808:1220378:126495612649561265777822Methylobacterium extorquens AM1, complete genomehypothetical protein1e-0859.3
NC_014923:1249267:126104712610471261634588Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete1e-0858.9
NC_012988:670101:689280689280690128849Methylobacterium extorquens DM4, complete genomehypothetical protein1e-0858.9
NC_012811:1105395:112850911285091129255747Methylobacterium extorquens AM1 megaplasmid, complete sequencehypothetical protein1e-0858.9
NC_013406:2207520:221306922130692213377309Paenibacillus sp. Y412MC10 chromosome, complete genomeErfK/YbiS/YcfS/YnhG family protein2e-0858.5
NC_013595:9651019:967051096705109671421912Streptosporangium roseum DSM 43021, complete genomehypothetical protein4e-0857.4
NC_010505:5077162:508577750857775086580804Methylobacterium radiotolerans JCM 2831, complete genomeErfK/YbiS/YcfS/YnhG family protein6e-0857
NC_007946:2155454:216844421684442169379936Escherichia coli UTI89, complete genomehypothetical protein1e-0755.8
NC_004431:2304280:231727923172792318214936Escherichia coli CFT073, complete genomeProtein erfK/srfK precursor1e-0755.8
NC_008253:2056734:206975620697562070691936Escherichia coli 536, complete genomeprotein ErfK/SrfK precursor1e-0755.8
CP002797:2062006:206338120633812064313933Escherichia coli NA114, complete genomehypothetical protein1e-0755.8
NC_008609:2787274:278921827892182789796579Pelobacter propionicus DSM 2379, complete genomeErfK/YbiS/YcfS/YnhG family protein1e-0755.8
NC_013421:2972269:3005361300536130063831023Pectobacterium wasabiae WPP163, complete genomeErfK/YbiS/YcfS/YnhG family protein1e-0755.8
NC_011283:1811000:188336118833611884296936Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein2e-0755.1
NC_009348:1347500:135138913513891352306918Aeromonas salmonicida subsp. salmonicida A449, complete genomehypothetical protein3e-0754.7
NC_011601:2139188:217742621774262178358933Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein3e-0754.7
NC_009800:2083465:210099321009932101925933Escherichia coli HS, complete genomeErfK/YbiS/YcfS/YnhG family protein3e-0754.7
AP010958:2455052:245747824574782458410933Escherichia coli O103:H2 str. 12009 DNA, complete genomeconserved hypothetical protein ErfK6e-0753.5
NC_013353:2455052:245747824574782458410933Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein6e-0753.5
NC_016822:2201388:224050722405072241439933Shigella sonnei 53G, complete genomeL,D-transpeptidase6e-0753.5
NC_010468:1816359:181880018188001819723924Escherichia coli ATCC 8739, complete genomeErfK/YbiS/YcfS/YnhG family protein6e-0753.5
NC_012917:2786283:2804764280476428057861023Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeErfK/YbiS/YcfS/YnhG family protein5e-0753.5
AC_000091:2027648:206452820645282065460933Escherichia coli W3110 DNA, complete genomeconserved hypothetical protein with NAD(P)-binding Rossmann-fold domain7e-0753.1
NC_000913:2042935:206041520604152061347933Escherichia coli K12, complete genomeconserved protein with NAD(P)-binding Rossmann-fold domain7e-0753.1
NC_010473:2119480:215142321514232152355933Escherichia coli str. K-12 substr. DH10B, complete genomeconserved protein with NAD(P)-binding Rossmann-fold domain7e-0753.1
NC_011745:2209288:226943222694322270364933Escherichia coli ED1a chromosome, complete genomehypothetical protein7e-0753.1
NC_012759:1920955:195289819528981953830933Escherichia coli BW2952 chromosome, complete genomehypothetical protein7e-0753.1
NC_012967:1967675:200039120003912001323933Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein7e-0753.1
NC_012947:1769438:177133417713341772269936Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein7e-0753.1
NC_012988:4353000:437534843753484376079732Methylobacterium extorquens DM4, complete genomehypothetical protein1e-0652.4
NC_015663:4906652:492354349235434924484942Enterobacter aerogenes KCTC 2190 chromosome, complete genomeL,D-transpeptidase2e-0652
NC_021066:601029:605224605224606165942Raoultella ornithinolytica B6, complete genomeL,D-transpeptidase3e-0651.2
NC_016612:5296076:531862453186245319565942Klebsiella oxytoca KCTC 1686 chromosome, complete genomeL,D-transpeptidase4e-0650.8
NC_011149:2040396:205413720541372055066930Salmonella enterica subsp. enterica serovar Agona str. SL483,protein ErfK/srfK9e-0649.3
NC_011094:2061000:207582520758252076754930Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein1e-0549.3