Pre_GI: BLASTP Hits

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Query: NC_006510:1731939:1734439 Geobacillus kaustophilus HTA426, complete genome

Start: 1734439, End: 1734762, Length: 324

Host Lineage: Geobacillus kaustophilus; Geobacillus; Bacillaceae; Bacillales; Firmicutes; Bacteria

General Information: Geobacillus kaustophilus strain HTA426 was first isolated from deep sea sediment of the Mariana Trench in the Pacific Ocean and belongs to a closely related group of thermophilic Bacillus spp. Members of this genus were originally classified as Bacillus. Recent rDNA analysis and DNA-DNA hybridization studies using spore-forming thermophilic subsurface isolates provided enough evidence to define the phylogenetically distinct, physiologically and morphologically consistent taxon Geobacillus. Geobacillus species are chemo-organotrophic, obligately thermophilic, motile, spore-forming, aerobic or facultatively anaerobic. This organism was compared with mesophilic Bacillus spp. to identify genome characteristics and specific genes related to thermophilia. Analysis of the amino acid compositions showed clear differences between Geobacillus kaustophilus and the mesophilic bacilli. In addition, the higher G+C content in Geobacillus kaustophilus rRNA also appears correlated to thermophilia. In addition, tRNA modification by the Geobacillus kaustophilus specific tRNA methyltransferases probably aids in the thermoadaptation of this organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020272:430500:4542944542944556071314Bacillus amyloliquefaciens IT-45, complete genomeNa(+)/H(+) antiporter nhaB Sodium/proton antiporter nhaB7e-26115
NC_004129:2440744:2440744244074424420271284Pseudomonas fluorescens Pf-5, complete genomearsenite efflux transporter2e-1064.3
NC_017192:276187:2975892975892988391251Arcobacter sp. L, complete genomearsenical pump membrane protein7e-0959.3
NC_016047:683368:6911596911596924661308Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completehypothetical protein1e-0858.2
NC_015690:3477573:3519260351926035205521293Paenibacillus mucilaginosus KNP414 chromosome, complete genomeYdfA3e-0857.4
NC_010102:4557037:4558050455805045593391290Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein5e-0856.2
NC_012912:2800884:2813715281371528149981284Dickeya zeae Ech1591, complete genomearsenical pump membrane protein6e-0856.2
NC_015420:35384:6148614874431296Lactobacillus buchneri NRRL B-30929 plasmid pLBUC01, completearsenical pump membrane protein1e-0755.5
NC_002947:2157648:2175256217525621765391284Pseudomonas putida KT2440, complete genomearsenite efflux transporter1e-0755.1
NC_011094:688626:6935786935786948671290Salmonella enterica subsp. enterica serovar Schwarzengrund strarsenical pump membrane protein2e-0754.3
NC_009425:63709:8549385493867821290Enterobacter sp. 638 plasmid pENTE01, complete sequencearsenical pump membrane protein1e-0652.4
NC_009801:3956917:3960467396046739617561290Escherichia coli E24377A, complete genomearsenical pump membrane protein1e-0652
NC_004337:3621985:3625401362540136266901290Shigella flexneri 2a str. 301, complete genomearsenical pump membrane protein1e-0652
AP010958:4313462:4315867431586743171561290Escherichia coli O103:H2 str. 12009 DNA, complete genomearsenite/antimonite transporter ArsB1e-0652
NC_000913:3624826:3646958364695836482471290Escherichia coli K12, complete genomearsenite/antimonite transporter1e-0652
NC_004741:4132056:4147018414701841483071290Shigella flexneri 2a str. 2457T, complete genomearsenical pump membrane protein1e-0652
NC_004337:3590323:3625401362540136266901290Shigella flexneri 2a str. 301, complete genomearsenical pump membrane protein1e-0652
CP002516:246767:2603692603692616581290Escherichia coli KO11, complete genomearsenical pump membrane protein1e-0652
NC_010473:3722571:3744703374470337459921290Escherichia coli str. K-12 substr. DH10B, complete genomearsenite/antimonite transporter1e-0652
NC_010468:231000:2432322432322445211290Escherichia coli ATCC 8739, complete genomearsenical pump membrane protein1e-0652
CP002185:3822470:3844415384441538457041290Escherichia coli W, complete genomearsenite/antimonite transporter1e-0652
NC_009800:3685651:3691446369144636927351290Escherichia coli HS, complete genomearsenical pump membrane protein1e-0652
NC_008258:3581583:3585187358518735864761290Shigella flexneri 5 str. 8401, complete genomearsenical pump membrane protein1e-0652
CU928160:3709081:3712631371263137139201290Escherichia coli IAI1 chromosome, complete genomearsenite/antimonite transporter1e-0652
NC_010498:3838419:3860362386036238616511290Escherichia coli SMS-3-5, complete genomearsenical pump membrane protein1e-0652
AC_000091:3976888:3990191399019139914801290Escherichia coli W3110 DNA, complete genomearsenite/antimonite transporter1e-0652
NC_011415:3887997:3893792389379238950811290Escherichia coli SE11 chromosome, complete genomearsenite transport protein1e-0652
NC_017328:3655876:3660397366039736617071311Shigella flexneri 2002017 chromosome, complete genomeputative Na+/H+ antiporter NhaD-like arsenite permease1e-0652
NC_007613:3470314:3493874349387434951841311Shigella boydii Sb227, complete genomearsenical pump membrane protein1e-0652
NC_011748:3983432:4013743401374340150321290Escherichia coli 55989, complete genomearsenite/antimonite transporter1e-0652
CU928145:3983432:4013743401374340150321290Escherichia coli 55989 chromosome, complete genomearsenite/antimonite transporter1e-0652
NC_016902:246767:2603692603692616581290Escherichia coli KO11FL chromosome, complete genomearsenical pump membrane protein1e-0652
NC_016822:3946500:3947168394716839484571290Shigella sonnei 53G, complete genomearsenical pump membrane protein1e-0652
NC_013364:4306000:4306825430682543081141290Escherichia coli O111:H- str. 11128, complete genomearsenite/antimonite transporter ArsB1e-0652
NC_013361:4566779:4569415456941545707041290Escherichia coli O26:H11 str. 11368 chromosome, complete genomearsenite/antimonite transporter ArsB1e-0652
NC_013353:4313462:4315867431586743171561290Escherichia coli O103:H2 str. 12009, complete genomearsenite/antimonite transporter ArsB1e-0652
NC_012967:3549880:3579625357962535809141290Escherichia coli B str. REL606 chromosome, complete genomearsenite/antimonite transporter1e-0652
NC_012947:248000:2602622602622615511290Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completearsenical pump membrane protein1e-0652
NC_012759:3529657:3535452353545235367411290Escherichia coli BW2952 chromosome, complete genomearsenite/antimonite transporter1e-0652
NC_011741:3709081:3712631371263137139201290Escherichia coli IAI1 chromosome, complete genomearsenite/antimonite transporter1e-0652
NC_020209:1847895:1864615186461518658981284Pseudomonas poae RE*1-1-14, complete genomearsenical pump membrane protein3e-0650.4
NC_009832:2596344:2611037261103726123261290Serratia proteamaculans 568, complete genomearsenical pump membrane protein4e-0650.4