Pre_GI: BLASTP Hits

Some Help

Query: NC_006510:1400000:1415631 Geobacillus kaustophilus HTA426, complete genome

Start: 1415631, End: 1417301, Length: 1671

Host Lineage: Geobacillus kaustophilus; Geobacillus; Bacillaceae; Bacillales; Firmicutes; Bacteria

General Information: Geobacillus kaustophilus strain HTA426 was first isolated from deep sea sediment of the Mariana Trench in the Pacific Ocean and belongs to a closely related group of thermophilic Bacillus spp. Members of this genus were originally classified as Bacillus. Recent rDNA analysis and DNA-DNA hybridization studies using spore-forming thermophilic subsurface isolates provided enough evidence to define the phylogenetically distinct, physiologically and morphologically consistent taxon Geobacillus. Geobacillus species are chemo-organotrophic, obligately thermophilic, motile, spore-forming, aerobic or facultatively anaerobic. This organism was compared with mesophilic Bacillus spp. to identify genome characteristics and specific genes related to thermophilia. Analysis of the amino acid compositions showed clear differences between Geobacillus kaustophilus and the mesophilic bacilli. In addition, the higher G+C content in Geobacillus kaustophilus rRNA also appears correlated to thermophilia. In addition, tRNA modification by the Geobacillus kaustophilus specific tRNA methyltransferases probably aids in the thermoadaptation of this organism.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020210:1275031:1294813129481312964831671Geobacillus sp. GHH01, complete genomehypothetical protein01075
NC_008536:2079052:2112674211267421140861413Solibacter usitatus Ellin6076, complete genomeputative DNA helicase5e-31136
NC_008786:4579490:4593935459393545960852151Verminephrobacter eiseniae EF01-2, complete genomeUvrD/REP helicase6e-1996.3
NC_010498:4930649:4936987493698749391012115Escherichia coli SMS-3-5, complete genomeATP-dependent DNA helicase UvrD5e-1789.7
NC_002695:5381576:5387914538791453900282115Escherichia coli O157:H7 str. Sakai, complete genomeputative DNA helicase5e-1789.7
NC_011353:5426793:5461562546156254636762115Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeATP-dependent DNA helicase, UvrD/REP family5e-1789.7
NC_011353:5455224:5461562546156254636762115Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeATP-dependent DNA helicase, UvrD/REP family5e-1789.7
NC_013008:5382917:5417623541762354197372115Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehelicase5e-1789.7
NC_013008:5411285:5417623541762354197372115Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehelicase5e-1789.7
NC_013941:5192500:5226179522617952282932115Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeATP-dependent DNA helicase, UvrD/REP family5e-1789.7
NC_013941:5219841:5226179522617952282932115Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeATP-dependent DNA helicase, UvrD/REP family5e-1789.7
NC_018524:4235773:4249796424979642519342139Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeuvrD/REP helicase N-terminal domain protein8e-1789
NC_003902:1220600:1233504123350412355822079Xanthomonas campestris pv. campestris str. ATCC 33913, completeputative DNA helicase5e-1686.7
NC_011768:1889853:1899436189943619008391404Desulfatibacillum alkenivorans AK-01, complete genomeSuperfamily I DNA and RNA helicase-like protein5e-1686.7
NC_019903:1745849:1745849174584917472641416Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,DNA/RNA helicase5e-1686.3
NC_008596:1302000:1343125134312513453382214Mycobacterium smegmatis str. MC2 155, complete genomeUvrD/Rep helicase4e-1583.2
NC_017080:166180:1808561808561829672112Phycisphaera mikurensis NBRC 102666, complete genomeputative helicase4e-1480.1
NC_010554:2646806:2704877270487727070122136Proteus mirabilis HI4320, complete genomeDNA helicase5e-1479.7
NC_007498:3399478:3401690340169034036661977Pelobacter carbinolicus DSM 2380, complete genomehypothetical protein6e-1479.3
NC_016010:1247008:1261395126139512634732079Xanthomonas axonopodis pv. citrumelo F1 chromosome, completeSuperfamily I DNA and RNA helicase6e-1479.3
NC_006958:748500:7623767623767646762301Corynebacterium glutamicum ATCC 13032, complete genomePUTATIVE DNA HELICASE1e-1379
NC_003450:747000:7609037609037632032301Corynebacterium glutamicum ATCC 13032, complete genomeputative helicase1e-1379
NC_013216:1442044:1461394146139414635142121Desulfotomaculum acetoxidans DSM 771, complete genomeUvrD/REP helicase4e-1376.6
NC_008740:1484531:1492814149281414948652052Marinobacter aquaeolei VT8, complete genomesuperfamily I DNA and RNA helicase2e-1274.3
NC_013757:3897413:3909839390983939120972259Geodermatophilus obscurus DSM 43160, complete genomeUvrD/REP helicase2e-1274.3
NC_007645:5801295:5823205582320558252322028Hahella chejuensis KCTC 2396, complete genomeSuperfamily I DNA and RNA helicase1e-1172
NC_011880:56543:6051160511625982088Cyanothece sp. PCC 7425 plasmid pP742501, complete sequenceUvrD/REP helicase2e-1171.2
NC_014720:4170:2587325873283322460Caldicellulosiruptor kronotskyensis 2002 chromosome, completelexa repressor3e-1170.9
NC_004722:4405363:4435208443520844366261419Bacillus cereus ATCC 14579, complete genomeSuperfamily I DNA and RNA helicases2e-1170.9
NC_017068:1143515:1166667116666711688052139Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative UvrD/REP family DNA helicase3e-1170.5
NC_020209:4312892:4327643432764343290581416Pseudomonas poae RE*1-1-14, complete genomehypothetical protein7e-1169.3
NC_012034:6469:3152031520339792460Anaerocellum thermophilum DSM 6725, complete genomeLexA repressor7e-1169.3
NC_016111:1484424:1498642149864215009602319Streptomyces cattleya NRRL 8057, complete genomeDNA helicase1e-1068.6
NC_016599:3434996:3434996343499634373742379Owenweeksia hongkongensis DSM 17368 chromosome, complete genomeDNA/RNA helicase1e-1068.2
NC_015978:352478:3729943729943752942301Lactobacillus sanfranciscensis TMW 1.1304 chromosome, completehypothetical protein4e-1067
NC_013441:382597:3963933963933985372145Gordonia bronchialis DSM 43247, complete genomeUvrD/REP helicase1e-0965.5
NC_010002:4038500:4045257404525740470621806Delftia acidovorans SPH-1, complete genomeNERD domain protein1e-0965.1
NC_017192:683493:6873356873356893952061Arcobacter sp. L, complete genomeATP-dependent DNA helicase UvrD2e-0964.3
NC_013929:2375613:2431613243161324339072295Streptomyces scabiei 87.22 chromosome, complete genomehelicase4e-0963.5
NC_017208:1050414:1066257106625710685932337Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeATP-dependent DNA helicase rep1e-0758.2
NC_011772:1011220:1023748102374810260842337Bacillus cereus G9842, complete genomehelicase, UvrD/Rep family4e-0756.6
NC_003909:1139556:113955611395561140365810Bacillus cereus ATCC 10987, complete genomehypothetical protein6e-0756.2
NC_016935:7872425:7878284787828478802091926Paenibacillus mucilaginosus 3016 chromosome, complete genomeNERD domain-containing protein6e-0756.2
NC_015690:7785875:7806015780601578079401926Paenibacillus mucilaginosus KNP414 chromosome, complete genomeNERD domain-containing protein1e-0655.5
NC_012438:192065:1930181930181951202103Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeATP-dependent DNA helicase PcrA2e-0654.7
NC_003366:728859:7480767480767501962121Clostridium perfringens str. 13, complete genomehypothetical protein2e-0654.3
NC_008261:676000:6953866953866975062121Clostridium perfringens ATCC 13124, complete genomeputative helicase2e-0654.3
NC_014253:312354:3422963422963441881893Methanohalobium evestigatum Z-7303 chromosome, complete genomehypothetical protein4e-0653.5
NC_011205:4761598:4772922477292247747631842Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853DNA helicase II5e-0653.1
NC_007969:2885249:2892227289222728950942868Psychrobacter cryohalolentis K5, complete genomeUvrD/REP helicase5e-0653.1
NC_011274:4577402:4588873458887345907141842Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91type I restriction enzyme5e-0653.1
NC_011294:4604283:4615608461560846174491842Salmonella enterica subsp. enterica serovar Enteritidis strtype I restriction enzyme5e-0653.1
NC_016831:4556761:4568232456823245700731842Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative Type I restriction enzyme5e-0653.1
NC_015975:441580:4644374644374667162280Lactobacillus ruminis ATCC 27782 chromosome, complete genomeATP-dependent DNA helicase7e-0652.8
NC_013665:918313:9634339634339666963264Methanocella paludicola SANAE, complete genomeputative ATP-dependent DNA helicase7e-0652.8
NC_016779:991298:1009000100900010113302331Bacillus cereus F837/76 chromosome, complete genomeUvrD/Rep family helicase7e-0652.8
NC_008262:654000:6735736735736756932121Clostridium perfringens SM101, complete genomehelicase, putative7e-0652.8