Query: NC_006361:714944 Nocardia farcinica IFM 10152, complete genome
Start: 714944, End: 733784, Length: 18841
Host Lineage: Nocardia farcinica; Nocardia; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: This type strain was isolated from the bronchus of a male Japanese patient. Opportunistic human pathogen. This genus was originally described from specimens isolated by plating soil suspensions on diagnostic sensitivity test plates augmented with antifungal agents. Organisms in this genus cause opportunistic human pulmonary and systemic nocardiosis. This can complicate existing debilitating conditions such as leukemia, lymphoma, or other neoplasms, or illnesses in patients with compromised immune systems.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_013595:5282207 | 5282207 | 5314429 | 32223 | Streptosporangium roseum DSM 43021, complete genome | 2e-139 | 504 | BLASTN svg | BLASTP svg |
| NC_013093:7437033 | 7437033 | 7459917 | 22885 | Actinosynnema mirum DSM 43827, complete genome | 7e-19 | 103 | BLASTN svg | BLASTP svg |
| NC_013595:151500 | 151500 | 178599 | 27100 | Streptosporangium roseum DSM 43021, complete genome | 1e-17 | 99.6 | BLASTN svg | BLASTP svg |
| NC_018681:867230* | 867230 | 901730 | 34501 | Nocardia brasiliensis ATCC 700358 chromosome, complete genome | 6e-16 | 93.7 | BLASTN svg | BLASTP svg |
| NC_013510:39975* | 39975 | 62218 | 22244 | Thermomonospora curvata DSM 43183, complete genome | 6e-16 | 93.7 | BLASTN svg | BLASTP svg |
| NC_019673:1420198* | 1420198 | 1447865 | 27668 | Saccharothrix espanaensis DSM 44229 complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
| NC_010612:5626259* | 5626259 | 5645099 | 18841 | Mycobacterium marinum M, complete genome | 2e-12 | 81.8 | BLASTN svg | BLASTP svg |
| NC_009142:827912* | 827912 | 849126 | 21215 | Saccharopolyspora erythraea NRRL 2338, complete genome | 2e-12 | 81.8 | BLASTN svg | BLASTP svg |
| NC_003888:3602753 | 3602753 | 3626462 | 23710 | Streptomyces coelicolor A3(2), complete genome | 9e-12 | 79.8 | BLASTN svg | BLASTP svg |
| NC_003155:4592000 | 4592000 | 4636144 | 44145 | Streptomyces avermitilis MA-4680, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_002944:865425* | 865425 | 899160 | 33736 | Mycobacterium avium subsp. paratuberculosis K-10, complete genome | 1e-10 | 75.8 | BLASTN svg | BLASTP svg |
| NC_015312:5876957* | 5876957 | 5900279 | 23323 | Pseudonocardia dioxanivorans CB1190 chromosome, complete genome | 1e-10 | 75.8 | BLASTN svg | BLASTP svg |
| NC_013595:9547254* | 9547254 | 9578639 | 31386 | Streptosporangium roseum DSM 43021, complete genome | 2e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_013595:702482* | 702482 | 728099 | 25618 | Streptosporangium roseum DSM 43021, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_014318:5586287* | 5586287 | 5622485 | 36199 | Amycolatopsis mediterranei U32 chromosome, complete genome | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_009921:6691089 | 6691089 | 6733099 | 42011 | Frankia sp. EAN1pec, complete genome | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_014391:621062* | 621062 | 644689 | 23628 | Micromonospora aurantiaca ATCC 27029 chromosome, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_014815:841484* | 841484 | 898099 | 56616 | Micromonospora sp. L5 chromosome, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_014318:6539137 | 6539137 | 6563527 | 24391 | Amycolatopsis mediterranei U32 chromosome, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_013757:900500 | 900500 | 918369 | 17870 | Geodermatophilus obscurus DSM 43160, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_009921:7660795 | 7660795 | 7678702 | 17908 | Frankia sp. EAN1pec, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_011896:2502000* | 2502000 | 2521875 | 19876 | Mycobacterium leprae Br4923, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
| NC_002677:2500000* | 2500000 | 2522099 | 22100 | Mycobacterium leprae TN, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |