Query: NC_006361:498305 Nocardia farcinica IFM 10152, complete genome
Start: 498305, End: 517099, Length: 18795
Host Lineage: Nocardia farcinica; Nocardia; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: This type strain was isolated from the bronchus of a male Japanese patient. Opportunistic human pathogen. This genus was originally described from specimens isolated by plating soil suspensions on diagnostic sensitivity test plates augmented with antifungal agents. Organisms in this genus cause opportunistic human pulmonary and systemic nocardiosis. This can complicate existing debilitating conditions such as leukemia, lymphoma, or other neoplasms, or illnesses in patients with compromised immune systems.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_010612:6113155 | 6113155 | 6132654 | 19500 | Mycobacterium marinum M, complete genome | 9e-43 | 182 | BLASTN svg | BLASTP svg |
| NC_020133:5710661 | 5710661 | 5732244 | 21584 | Mycobacterium liflandii 128FXT, complete genome | 2e-40 | 174 | BLASTN svg | BLASTP svg |
| NC_008699:2916752 | 2916752 | 2939066 | 22315 | Nocardioides sp. JS614, complete genome | 4e-26 | 127 | BLASTN svg | BLASTP svg |
| NC_013093:4247811 | 4247811 | 4270816 | 23006 | Actinosynnema mirum DSM 43827, complete genome | 4e-20 | 107 | BLASTN svg | BLASTP svg |
| NC_018681:867230* | 867230 | 901730 | 34501 | Nocardia brasiliensis ATCC 700358 chromosome, complete genome | 2e-19 | 105 | BLASTN svg | BLASTP svg |
| NC_014168:2575799* | 2575799 | 2610113 | 34315 | Segniliparus rotundus DSM 44985 chromosome, complete genome | 2e-16 | 95.6 | BLASTN svg | BLASTP svg |
| NC_021177:2139838 | 2139838 | 2164842 | 25005 | Streptomyces fulvissimus DSM 40593, complete genome | 4e-14 | 87.7 | BLASTN svg | BLASTP svg |
| NC_013595:4031947* | 4031947 | 4063298 | 31352 | Streptosporangium roseum DSM 43021, complete genome | 1e-10 | 75.8 | BLASTN svg | BLASTP svg |
| NC_009921:3384116* | 3384116 | 3408953 | 24838 | Frankia sp. EAN1pec, complete genome | 1e-10 | 75.8 | BLASTN svg | BLASTP svg |
| NC_012779:2127542 | 2127542 | 2165308 | 37767 | Edwardsiella ictaluri 93-146, complete genome | 9e-09 | 69.9 | BLASTN svg | BLASTP svg |
| NC_006361:3615322 | 3615322 | 3637149 | 21828 | Nocardia farcinica IFM 10152, complete genome | 9e-09 | 69.9 | BLASTN svg | BLASTP svg |
| NC_014931:5573942 | 5573942 | 5594099 | 20158 | Variovorax paradoxus EPS chromosome, complete genome | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_015593:158107 | 158107 | 200099 | 41993 | Sphingobium chlorophenolicum L-1 chromosome chromosome 1, complete | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_012792:547967 | 547967 | 587717 | 39751 | Variovorax paradoxus S110 chromosome 2, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_001263:2461941* | 2461941 | 2483019 | 21079 | Deinococcus radiodurans R1 chromosome 1, complete sequence | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_013093:1411882* | 1411882 | 1438302 | 26421 | Actinosynnema mirum DSM 43827, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_013131:7889127* | 7889127 | 7915269 | 26143 | Catenulispora acidiphila DSM 44928, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_015656:381554* | 381554 | 407336 | 25783 | Frankia symbiont of Datisca glomerata chromosome, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_018581:4992952 | 4992952 | 5016894 | 23943 | Gordonia sp. KTR9 chromosome, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
| NC_015856:633353 | 633353 | 657000 | 23648 | Collimonas fungivorans Ter331 chromosome, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
| NC_011146:4070000 | 4070000 | 4092099 | 22100 | Geobacter bemidjiensis Bem, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
| NC_011144:2674242 | 2674242 | 2703176 | 28935 | Phenylobacterium zucineum HLK1, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
| NC_008705:4975402 | 4975402 | 4998243 | 22842 | Mycobacterium sp. KMS, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |