Query: NC_006361:3615322 Nocardia farcinica IFM 10152, complete genome
Start: 3615322, End: 3637149, Length: 21828
Host Lineage: Nocardia farcinica; Nocardia; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: This type strain was isolated from the bronchus of a male Japanese patient. Opportunistic human pathogen. This genus was originally described from specimens isolated by plating soil suspensions on diagnostic sensitivity test plates augmented with antifungal agents. Organisms in this genus cause opportunistic human pulmonary and systemic nocardiosis. This can complicate existing debilitating conditions such as leukemia, lymphoma, or other neoplasms, or illnesses in patients with compromised immune systems.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_020133:142790 | 142790 | 167977 | 25188 | Mycobacterium liflandii 128FXT, complete genome | 7e-87 | 329 | BLASTN svg | BLASTP svg |
| NC_013947:1011899* | 1011899 | 1035695 | 23797 | Stackebrandtia nassauensis DSM 44728 chromosome, complete genome | 6e-78 | 299 | BLASTN svg | BLASTP svg |
| NC_013757:4707960* | 4707960 | 4741734 | 33775 | Geodermatophilus obscurus DSM 43160, complete genome | 6e-78 | 299 | BLASTN svg | BLASTP svg |
| NC_008278:5855401* | 5855401 | 5894991 | 39591 | Frankia alni ACN14a, complete genome | 1e-45 | 192 | BLASTN svg | BLASTP svg |
| NC_007777:2749422 | 2749422 | 2774561 | 25140 | Frankia sp. CcI3, complete genome | 4e-39 | 170 | BLASTN svg | BLASTP svg |
| NC_018581:4992952 | 4992952 | 5016894 | 23943 | Gordonia sp. KTR9 chromosome, complete genome | 6e-38 | 167 | BLASTN svg | BLASTP svg |
| NC_008278:2732890* | 2732890 | 2785591 | 52702 | Frankia alni ACN14a, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
| NC_008726:925895 | 925895 | 948099 | 22205 | Mycobacterium vanbaalenii PYR-1, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_015588:2200517* | 2200517 | 2227245 | 26729 | Isoptericola variabilis 225 chromosome, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
| NC_021177:2139838 | 2139838 | 2164842 | 25005 | Streptomyces fulvissimus DSM 40593, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_014210:3817948 | 3817948 | 3840297 | 22350 | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome, | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_009921:3455783 | 3455783 | 3477392 | 21610 | Frankia sp. EAN1pec, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_006361:498305 | 498305 | 517099 | 18795 | Nocardia farcinica IFM 10152, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_014168:2575799* | 2575799 | 2610113 | 34315 | Segniliparus rotundus DSM 44985 chromosome, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_001263:2461941* | 2461941 | 2483019 | 21079 | Deinococcus radiodurans R1 chromosome 1, complete sequence | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_008705:4975402 | 4975402 | 4998243 | 22842 | Mycobacterium sp. KMS, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_007333:1129826 | 1129826 | 1159117 | 29292 | Thermobifida fusca YX, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |