Pre_GI: BLASTN Hits

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Query: NC_006361:3132000 Nocardia farcinica IFM 10152, complete genome

Start: 3132000, End: 3161451, Length: 29452

Host Lineage: Nocardia farcinica; Nocardia; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This type strain was isolated from the bronchus of a male Japanese patient. Opportunistic human pathogen. This genus was originally described from specimens isolated by plating soil suspensions on diagnostic sensitivity test plates augmented with antifungal agents. Organisms in this genus cause opportunistic human pulmonary and systemic nocardiosis. This can complicate existing debilitating conditions such as leukemia, lymphoma, or other neoplasms, or illnesses in patients with compromised immune systems.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_013510:22887462288746230946520720Thermomonospora curvata DSM 43183, complete genome0676BLASTN svgBLASTP svg
NC_013947:19569231956923198076223840Stackebrandtia nassauensis DSM 44728 chromosome, complete genome1e-113418BLASTN svgBLASTP svg
NC_009921:1813500*1813500184695033451Frankia sp. EAN1pec, complete genome5e-107396BLASTN svgBLASTP svg
NC_015312:5876957*5876957590027923323Pseudonocardia dioxanivorans CB1190 chromosome, complete genome1e-101379BLASTN svgBLASTP svg
NC_015740:15943761594376161634721972Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete3e-62248BLASTN svgBLASTP svg
NC_009434:17436961743696176409920404Pseudomonas stutzeri A1501, complete genome4e-55224BLASTN svgBLASTP svg
NC_003552:11572941157294117654819255Methanosarcina acetivorans C2A, complete genome6e-51210BLASTN svgBLASTP svg
NC_002947:41675004167500424373376234Pseudomonas putida KT2440, complete genome1e-48202BLASTN svgBLASTP svg
NC_014216:28603422860342288514124800Desulfurivibrio alkaliphilus AHT2 chromosome, complete genome6e-48200BLASTN svgBLASTP svg
NC_014836:2848000*2848000287078522786Desulfurispirillum indicum S5 chromosome, complete genome6e-48200BLASTN svgBLASTP svg
NC_010515:21116912111691217367661986Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence4e-46194BLASTN svgBLASTP svg
NC_008543:22206982220698226060739910Burkholderia cenocepacia HI2424 chromosome 2, complete sequence4e-46194BLASTN svgBLASTP svg
NC_008061:19028719028724895258666Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence4e-46194BLASTN svgBLASTP svg
NC_007005:49927304992730502132828599Pseudomonas syringae pv. syringae B728a, complete genome1e-45192BLASTN svgBLASTP svg
NC_009439:4267356*4267356429048723132Pseudomonas mendocina ymp, complete genome2e-44188BLASTN svgBLASTP svg
NC_015556:717993*71799374011322121Pseudomonas fulva 12-X chromosome, complete genome3e-43184BLASTN svgBLASTP svg
NC_010682:30336463033646306386630221Ralstonia pickettii 12J chromosome 1, complete sequence5e-36161BLASTN svgBLASTP svg
NC_013510:54994475499447554883349387Thermomonospora curvata DSM 43183, complete genome3e-34155BLASTN svgBLASTP svg
NC_008340:17337351733735176122027486Alkalilimnicola ehrlichei MLHE-1, complete genome2e-32149BLASTN svgBLASTP svg
NC_009921:56816775681677570432122645Frankia sp. EAN1pec, complete genome2e-29139BLASTN svgBLASTP svg
NC_019940:38631243863124388578022657Thioflavicoccus mobilis 8321 chromosome, complete genome1e-21113BLASTN svgBLASTP svg
NC_012559:23095662309566233407924514Laribacter hongkongensis HLHK9, complete genome4e-21111BLASTN svgBLASTP svg
NC_009832:35000003500000352233422335Serratia proteamaculans 568, complete genome4e-21111BLASTN svgBLASTP svg
NC_014391:27755527755529871021156Micromonospora aurantiaca ATCC 27029 chromosome, complete genome7e-20107BLASTN svgBLASTP svg
NC_012856:26338902633890266223728348Ralstonia pickettii 12D chromosome 1, complete genome3e-19105BLASTN svgBLASTP svg
NC_014659:27378432737843276016922327Rhodococcus equi 103S, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_012559:1228280*1228280127461346334Laribacter hongkongensis HLHK9, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_013093:57919615791961581744825488Actinosynnema mirum DSM 43827, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_015671:20114622011462203421622755Cellvibrio gilvus ATCC 13127 chromosome, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_020210:1704500*1704500175948154982Geobacillus sp. GHH01, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_012779:95755895755898306025503Edwardsiella ictaluri 93-146, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_009664:4423829*44238294686013262185Kineococcus radiotolerans SRS30216, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_006510:1731939*1731939177059938661Geobacillus kaustophilus HTA426, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_011059:2272747*2272747229869125945Prosthecochloris aestuarii DSM 271, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_008268:17486351748635177239623762Rhodococcus sp. RHA1, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_014963:48728834872883489666723785Terriglobus saanensis SP1PR4 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg