Query: NC_006361:1720031 Nocardia farcinica IFM 10152, complete genome
Start: 1720031, End: 1745299, Length: 25269
Host Lineage: Nocardia farcinica; Nocardia; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: This type strain was isolated from the bronchus of a male Japanese patient. Opportunistic human pathogen. This genus was originally described from specimens isolated by plating soil suspensions on diagnostic sensitivity test plates augmented with antifungal agents. Organisms in this genus cause opportunistic human pulmonary and systemic nocardiosis. This can complicate existing debilitating conditions such as leukemia, lymphoma, or other neoplasms, or illnesses in patients with compromised immune systems.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_009077:4810379 | 4810379 | 4839610 | 29232 | Mycobacterium sp. JLS, complete genome | 2e-62 | 248 | BLASTN svg | BLASTP svg |
| NC_010397:1802724 | 1802724 | 1843734 | 41011 | Mycobacterium abscessus chromosome Chromosome, complete sequence | 4e-30 | 141 | BLASTN svg | BLASTP svg |
| NC_014168:2820315 | 2820315 | 2846812 | 26498 | Segniliparus rotundus DSM 44985 chromosome, complete genome | 1e-23 | 119 | BLASTN svg | BLASTP svg |
| NC_013159:1422370* | 1422370 | 1441599 | 19230 | Saccharomonospora viridis DSM 43017, complete genome | 8e-16 | 93.7 | BLASTN svg | BLASTP svg |
| NC_007777:4016000* | 4016000 | 4038599 | 22600 | Frankia sp. CcI3, complete genome | 8e-16 | 93.7 | BLASTN svg | BLASTP svg |
| NC_014158:233733 | 233733 | 327711 | 93979 | Tsukamurella paurometabola DSM 20162 chromosome, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
| NC_008578:889907* | 889907 | 922194 | 32288 | Acidothermus cellulolyticus 11B, complete genome | 5e-14 | 87.7 | BLASTN svg | BLASTP svg |
| NC_013510:3640776* | 3640776 | 3658960 | 18185 | Thermomonospora curvata DSM 43183, complete genome | 5e-14 | 87.7 | BLASTN svg | BLASTP svg |
| NC_010162:3275265 | 3275265 | 3298310 | 23046 | Sorangium cellulosum 'So ce 56', complete genome | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |
| NC_009921:1736000* | 1736000 | 1754365 | 18366 | Frankia sp. EAN1pec, complete genome | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |
| NC_021177:2241647* | 2241647 | 2266498 | 24852 | Streptomyces fulvissimus DSM 40593, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
| NC_015957:8677395* | 8677395 | 8707779 | 30385 | Streptomyces violaceusniger Tu 4113 chromosome, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
| NC_010397:1751067 | 1751067 | 1801113 | 50047 | Mycobacterium abscessus chromosome Chromosome, complete sequence | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_010552:752007* | 752007 | 778099 | 26093 | Burkholderia ambifaria MC40-6 chromosome 2, complete sequence | 8e-10 | 73.8 | BLASTN svg | BLASTP svg |
| NC_010612:4400260 | 4400260 | 4423267 | 23008 | Mycobacterium marinum M, complete genome | 8e-10 | 73.8 | BLASTN svg | BLASTP svg |
| NC_010805:530876* | 530876 | 561440 | 30565 | Burkholderia multivorans ATCC 17616 chromosome 2, complete | 8e-10 | 73.8 | BLASTN svg | BLASTP svg |
| NC_012721:1986436* | 1986436 | 2012603 | 26168 | Burkholderia glumae BGR1 chromosome 2, complete genome | 8e-10 | 73.8 | BLASTN svg | BLASTP svg |
| NC_010086:1907959* | 1907959 | 1940275 | 32317 | Burkholderia multivorans ATCC 17616 chromosome 2, complete | 8e-10 | 73.8 | BLASTN svg | BLASTP svg |
| NC_012803:691215* | 691215 | 726788 | 35574 | Micrococcus luteus NCTC 2665, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_011886:1891077* | 1891077 | 1924599 | 33523 | Arthrobacter chlorophenolicus A6, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_013131:7889127* | 7889127 | 7915269 | 26143 | Catenulispora acidiphila DSM 44928, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_015376:1185000 | 1185000 | 1204562 | 19563 | Burkholderia gladioli BSR3 chromosome chromosome 2, complete | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_020209:997385* | 997385 | 1041388 | 44004 | Pseudomonas poae RE*1-1-14, complete genome | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_013510:991827* | 991827 | 1012599 | 20773 | Thermomonospora curvata DSM 43183, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_013235:2129982* | 2129982 | 2172185 | 42204 | Nakamurella multipartita DSM 44233, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_019673:2185005 | 2185005 | 2206896 | 21892 | Saccharothrix espanaensis DSM 44229 complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |