Pre_GI: BLASTP Hits

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Query: NC_006361:4597718:4624500 Nocardia farcinica IFM 10152, complete genome

Start: 4624500, End: 4625183, Length: 684

Host Lineage: Nocardia farcinica; Nocardia; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This type strain was isolated from the bronchus of a male Japanese patient. Opportunistic human pathogen. This genus was originally described from specimens isolated by plating soil suspensions on diagnostic sensitivity test plates augmented with antifungal agents. Organisms in this genus cause opportunistic human pulmonary and systemic nocardiosis. This can complicate existing debilitating conditions such as leukemia, lymphoma, or other neoplasms, or illnesses in patients with compromised immune systems.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012704:696374:705911705911706603693Corynebacterium kroppenstedtii DSM 44385, complete genometranscriptional regulator, TetR family9e-25113
NC_017093:5225864:523639552363955237063669Actinoplanes missouriensis 431, complete genomeputative TetR-family transcriptional regulator3e-22105
NC_009921:1813500:184397718439771844687711Frankia sp. EAN1pec, complete genometranscriptional regulator, TetR family1e-21102
NC_009664:4347718:435952443595244360177654Kineococcus radiotolerans SRS30216, complete genometranscriptional regulator, TetR family5e-21101
NC_008699:2294361:233821723382172338930714Nocardioides sp. JS614, complete genomeregulatory protein, TetR4e-1994.7
NC_014666:1117000:113313811331381133842705Frankia sp. EuI1c chromosome, complete genomeregulatory protein TetR1e-1893.2
NC_015434:666692:702511702511703194684Verrucosispora maris AB-18-032 chromosome, complete genomeTetR family transcriptional regulator1e-1790.1
NC_015434:2683631:269688526968852697439555Verrucosispora maris AB-18-032 chromosome, complete genomeTetR family transcriptional regulator2e-1272.8
NC_009664:4423829:442487344248734425499627Kineococcus radiotolerans SRS30216, complete genometranscriptional regulator, TetR family5e-1271.2
NC_013929:5850599:586993558699355870588654Streptomyces scabiei 87.22 chromosome, complete genometranscriptional regulator2e-1169.3
NC_015957:7348269:735711373571137357745633Streptomyces violaceusniger Tu 4113 chromosome, complete genomeregulatory protein TetR3e-1168.6
NC_009953:2867864:289295728929572893628672Salinispora arenicola CNS-205 chromosome, complete genomeTetR family transcriptional regulator2e-1066.2
NC_013521:2193203:219552721955272196075549Sanguibacter keddieii DSM 10542, complete genometranscriptional regulator, tetR family2e-1065.9
NC_013947:6221877:622643162264316226991561Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, TetR family3e-1065.5
NC_015957:7249873:726786572678657268458594Streptomyces violaceusniger Tu 4113 chromosome, complete genomeregulatory protein TetR4e-1065.1
NC_016582:7699420:770664677066467707239594Streptomyces bingchenggensis BCW-1 chromosome, complete genomeTetR family transcriptional regulator7e-1064.3
NC_015580:3411802:342310334231033423645543Novosphingobium sp. PP1Y, complete genomeTetR family transcriptional regulator7e-1063.9
NC_012489:3503632:350485135048513505480630Gemmatimonas aurantiaca T-27, complete genomeTetR family transcriptional regulator1e-0963.5
NC_014666:2629799:264302426430242643593570Frankia sp. EuI1c chromosome, complete genomeregulatory protein TetR2e-0962.8
NC_014307:1131241:114012811401281140727600Ralstonia solanacearum CFBP2957 chromosome, complete genomeTetR family transcriptional regulator3e-0962.4
NC_007508:5093365:510796051079605108592633Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative transcriptional regulator, TetR family3e-0962.4
NC_011365:1596652:161991016199101620509600Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeTetR family transcriptional regulator3e-0962.4
NC_003155:622993:653742653742654326585Streptomyces avermitilis MA-4680, complete genomeTetR-family transcriptional regulator5e-0961.2
NC_014323:3976351:400574140057414006313573Herbaspirillum seropedicae SmR1 chromosome, complete genometranscription regulator protein5e-0961.2
NC_013739:5535945:554067855406785541244567Conexibacter woesei DSM 14684, complete genometranscriptional regulator, TetR family7e-0960.8
NC_017955:343931:358000358000358650651Modestobacter marinus, complete genomeTetR family transcriptional regulator1e-0860.5
NC_009921:4903688:490439949043994905013615Frankia sp. EAN1pec, complete genometranscriptional regulator, TetR family1e-0859.7
NC_016114:7282882:730012873001287300718591Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeregulatory protein TetR2e-0859.7
NC_008278:613329:625168625168625779612Frankia alni ACN14a, complete genomeputative tetR-family transcriptional regulator2e-0859.7
NC_015138:4205986:422692442269244227514591Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeregulatory protein TetR3e-0858.5
NC_003888:4523500:452350245235024524395894Streptomyces coelicolor A3(2), complete genometetR-family transcriptional regulator7e-0857.4
NC_014310:1750817:175724317572431757839597Ralstonia solanacearum PSI07 megaplasmid, complete sequenceTetR family transcriptional regulator7e-0857.4
NC_015709:1769806:178762117876211788307687Zymomonas mobilis subsp. pomaceae ATCC 29192 chromosome, completeTetR family transcriptional regulator1e-0756.6
NC_003902:1416000:142181514218151422441627Xanthomonas campestris pv. campestris str. ATCC 33913, completetranscriptional regulator5e-0754.7
NC_010688:3515885:352608335260833526709627Xanthomonas campestris pv. campestris, complete genometranscriptional regulator, TetR family5e-0754.7
NC_016582:6999074:700012270001227000724603Streptomyces bingchenggensis BCW-1 chromosome, complete genomeTetR family transcriptional regulator7e-0754.3
NC_013526:955848:976385976385977116732Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeregulatory protein TetR9e-0753.9
NC_013850:2846069:285969628596962860289594Klebsiella variicola At-22 chromosome, complete genometranscriptional regulator, TetR family1e-0653.1
NC_007947:1703326:170922317092231709855633Methylobacillus flagellatus KT, complete genometranscriptional regulator, TetR family2e-0652.8
NC_014318:1537732:154140715414071541916510Amycolatopsis mediterranei U32 chromosome, complete genomeTetR family transcriptional regulator2e-0652.8
NC_008705:27434:515445154452149606Mycobacterium sp. KMS, complete genometranscriptional regulator, TetR family3e-0652.4
NC_008146:20047:442044420444809606Mycobacterium sp. MCS, complete genometranscriptional regulator, TetR family3e-0652.4
NC_014323:3976351:400723340072334007799567Herbaspirillum seropedicae SmR1 chromosome, complete genomeTetR family transcription regulator protein3e-0652.4
NC_011283:2836000:286975928697592870352594Klebsiella pneumoniae 342 chromosome, complete genometranscriptional regulator TetR family2e-0652.4
NC_018524:4848154:489638948963894896982594Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomebacterial regulatory s, lacI family protein4e-0651.6
NC_006177:1060428:107883110788311079454624Symbiobacterium thermophilum IAM 14863, complete genomeTetR family transcriptional regulator5e-0651.2
NC_009664:10718:169251692517515591Kineococcus radiotolerans SRS30216, complete genometranscriptional regulator, TetR family5e-0651.2
NC_013739:5705325:573395457339545734559606Conexibacter woesei DSM 14684, complete genometranscriptional regulator, TetR family6e-0651.2
NC_016113:1143580:116248011624801163136657Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequencetranscriptional regulator6e-0650.8