Pre_GI: BLASTP Hits

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Query: NC_006361:4574536:4585888 Nocardia farcinica IFM 10152, complete genome

Start: 4585888, End: 4586562, Length: 675

Host Lineage: Nocardia farcinica; Nocardia; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This type strain was isolated from the bronchus of a male Japanese patient. Opportunistic human pathogen. This genus was originally described from specimens isolated by plating soil suspensions on diagnostic sensitivity test plates augmented with antifungal agents. Organisms in this genus cause opportunistic human pulmonary and systemic nocardiosis. This can complicate existing debilitating conditions such as leukemia, lymphoma, or other neoplasms, or illnesses in patients with compromised immune systems.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_019673:1988853:203734320373432038008666Saccharothrix espanaensis DSM 44229 complete genomeCRISPR-associated Cse3 family protein5e-53207
NC_018720:1812000:181560918156091816298690Bifidobacterium asteroides PRL2011 chromosome, complete genomeCRISPR-associated protein, Cse3 family2e-44178
NC_013510:3117837:313535531353553136044690Thermomonospora curvata DSM 43183, complete genomeCRISPR-associated protein, Cse3 family2e-43176
NC_013131:4422000:442939544293954430105711Catenulispora acidiphila DSM 44928, complete genomeCRISPR-associated protein, Cse3 family2e-43175
NC_015389:481282:493873493873494562690Coriobacterium glomerans PW2 chromosome, complete genomeCRISPR-associated protein, Cse3 family3e-42171
NC_015434:2527412:252741225274122528089678Verrucosispora maris AB-18-032 chromosome, complete genomeCRISPR-associated Cse3 family protein3e-42171
NC_014210:1588426:159287215928721593591720Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,CRISPR-associated protein, Cse3 family4e-38157
NC_007333:1743890:183983018398301840453624Thermobifida fusca YX, complete genomeCRISPR-associated CT1974 family protein8e-37153
NC_016109:603829:615161615161615928768Kitasatospora setae KM-6054, complete genomeputative CRISPR-associated protein1e-32139
NC_012590:977920:990914990914991606693Corynebacterium aurimucosum ATCC 700975, complete genomeCRISPR-associated protein1e-30132
NC_008278:514600:526796526796527632837Frankia alni ACN14a, complete genomehypothetical protein3e-29128
NC_007164:775000:778422778422779096675Corynebacterium jeikeium K411, complete genomehypothetical protein1e-26119
NC_010610:795975:813168813168813842675Lactobacillus fermentum IFO 3956, complete genomehypothetical protein4e-22104
NC_008526:343445:354352354352354999648Lactobacillus casei ATCC 334, complete genomeCRISPR-associated protein4e-21101
NC_008054:745704:761596761596762219624Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completehypothetical protein3e-2098.6
NC_008529:735233:753740753740754363624Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeCRISPR-associated protein3e-2098.6
NC_014727:798191:816894816894817517624Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,crispr-associated protein6e-2097.4
NC_015737:2146953:215889821588982159530633Clostridium sp. SY8519, complete genomehypothetical protein5e-1684.7
NC_014318:6395392:644492564449256445575651Amycolatopsis mediterranei U32 chromosome, complete genomeCRISPR-associated CSE3 family protein6e-1684.3
NC_017186:6395435:644496964449696445619651Amycolatopsis mediterranei S699 chromosome, complete genomeCRISPR-associated CSE3 family protein6e-1684.3
NC_007356:1165760:120409112040911204720630Dehalococcoides sp. CBDB1, complete genomeputative CRISPR-associated protein4e-1478.2
NC_013890:1175931:117994111799411180570630Dehalococcoides sp. GT chromosome, complete genomeCRISPR-associated protein, Cse3 family4e-1478.2
NC_008609:2518993:252739825273982528072675Pelobacter propionicus DSM 2379, complete genomeCRISPR-associated protein, Cse3 family8e-1373.9
NC_009800:2889928:289702128970212897620600Escherichia coli HS, complete genomeCRISPR-associated protein, Cse3 family4e-1168.6
AC_000091:2872000:287844428784442879043600Escherichia coli W3110 DNA, complete genomehypothetical protein5e-1167.8
NC_010473:2963951:297035229703522970951600Escherichia coli str. K-12 substr. DH10B, complete genomehypothetical protein5e-1167.8
NC_000913:2873443:287781028778102878409600Escherichia coli K12, complete genomehypothetical protein5e-1167.8
NC_012759:2757826:276362227636222764221600Escherichia coli BW2952 chromosome, complete genomehypothetical protein5e-1167.8
NC_015170:54000:665796657967226648Deinococcus proteolyticus MRP plasmid pDEIPR03, complete sequenceCRISPR-associated protein, Cse3 family6e-1167.8
NC_010468:1029471:104301210430121043611600Escherichia coli ATCC 8739, complete genomeCRISPR-associated protein, Cse3 family9e-1167
NC_007775:723925:734975734975735607633Synechococcus sp. JA-3-3Ab, complete genomeCRISPR-associated protein, Cse3 family6e-1064.3
NC_007643:185135:201233201233201895663Rhodospirillum rubrum ATCC 11170, complete genomeCRISPR-associated CT1974 family protein2e-0962.4
NC_014355:1461355:147334514733451474043699Candidatus Nitrospira defluvii, complete genomeCRISPR-associated protein Cse31e-0860.1
NC_011894:5468500:549560154956015496332732Methylobacterium nodulans ORS 2060, complete genomeCRISPR-associated protein, Cse3 family3e-0858.9
NC_015676:1663700:167048916704891671172684Methanosalsum zhilinae DSM 4017 chromosome, complete genomeCRISPR-associated protein, Cse3 family4e-0858.2
NC_015951:107360:108626108626109270645Streptomyces violaceusniger Tu 4113 plasmid pSTRVI01, completeCRISPR-associated protein, Cse3 family9e-0857
NC_012912:1053618:105628810562881056935648Dickeya zeae Ech1591, complete genomeCRISPR-associated protein, Cse3 family1e-0757
NC_013851:759500:764003764003764632630Allochromatium vinosum DSM 180 chromosome, complete genomeCRISPR-associated protein, Cse3 family2e-0652.8
NC_007333:1743890:183036718303671831065699Thermobifida fusca YX, complete genomehypothetical protein2e-0652.4