Pre_GI: BLASTP Hits

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Query: NC_006361:1827991:1830543 Nocardia farcinica IFM 10152, complete genome

Start: 1830543, End: 1831292, Length: 750

Host Lineage: Nocardia farcinica; Nocardia; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This type strain was isolated from the bronchus of a male Japanese patient. Opportunistic human pathogen. This genus was originally described from specimens isolated by plating soil suspensions on diagnostic sensitivity test plates augmented with antifungal agents. Organisms in this genus cause opportunistic human pulmonary and systemic nocardiosis. This can complicate existing debilitating conditions such as leukemia, lymphoma, or other neoplasms, or illnesses in patients with compromised immune systems.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013929:7663631:768559876855987686464867Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein1e-1583.6
NC_018524:1279156:129815212981521299018867Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomebacterial signaling family protein2e-1376.3
NC_009921:5202607:521407752140775214898822Frankia sp. EAN1pec, complete genomeputative integral membrane sensor protein3e-1375.5
NC_016114:7116141:712426571242657125023759Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeintegral membrane sensor protein4e-0962
NC_008027:2996947:3002939300293930050292091Pseudomonas entomophila L48, complete genomediguanylate cyclase/phosphodiesterase (GGDEF & EAL domains)5e-0961.6
NC_010172:5447189:5447189544718954490871899Methylobacterium extorquens PA1, complete genomePAS sensor protein1e-0860.1
NC_011757:5742290:5746385574638557482831899Methylobacterium chloromethanicum CM4, complete genomePAS/PAC sensor signal transduction histidine kinase2e-0859.7
NC_010943:1379707:1398376139837614004332058Stenotrophomonas maltophilia K279a, complete genomeputative transmembrane GGDEF EAL signalling protein3e-0858.9
NC_015856:3832000:383201938320193832828810Collimonas fungivorans Ter331 chromosome, complete genomehypothetical protein6e-0858.2
NC_011757:5048714:5077244507724450796312388Methylobacterium chloromethanicum CM4, complete genomediguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(s)5e-0858.2
NC_007348:1903937:191748619174861918280795Ralstonia eutropha JMP134 chromosome 2, complete sequenceMHYT2e-0756.6
NC_006511:3364448:3364448336444833665472100Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative membrane domain involved in signal transduction; Diguanylate cyclase/phosphodiesterase domain 1; Diguanylate cyclase/phosphodiesterase domain3e-0755.8
NC_003911:2540453:2547244254724425483651122Silicibacter pomeroyi DSS-3, complete genomecarbon monoxide dehydrogenase operon C protein1e-0653.5
NC_010170:1417615:1420550142055014226612112Bordetella petrii, complete genomeprobable signalling protein2e-0653.1
NC_013946:879199:900612900612901367756Meiothermus ruber DSM 1279 chromosome, complete genomeputative integral membrane sensor protein4e-0652
NC_008544:55451:7208072080739151836Burkholderia cenocepacia HI2424 chromosome 3, complete sequenceperiplasmic sensor signal transduction histidine kinase7e-0650.8
NC_008062:81338:9426294262960971836Burkholderia cenocepacia AU 1054 chromosome 3, complete sequenceperiplasmic sensor signal transduction histidine kinase7e-0650.8