Pre_GI: BLASTN Hits

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Query: NC_006351:3159630 Burkholderia pseudomallei K96243 chromosome 2, complete sequence

Start: 3159630, End: 3185999, Length: 26370

Host Lineage: Burkholderia pseudomallei; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was a clinical isolate from Thailand. The genome of this organism carries many genomic islands as compared to the related organism B. mallei, suggesting extensive horizontal transfer. Opportunistic pathogen. This species is an opportunistic pathogen and can cause pneumonia, bacteremia, and melioidosis. It is normally found in terrestrial environments and has been recovered from rice paddies and moist tropical soil. It is endemic in Asia and Australia, but can be found in other parts of the world. The organism can exist intracellularly and can spread through the bloodstream (bacteremia).




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009937:4768500*4768500479259924100Azorhizobium caulinodans ORS 571, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_002927:506183*50618356896162779Bordetella bronchiseptica RB50, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_002928:507749*50774956809960351Bordetella parapertussis 12822, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_010557:20784620784622851620671Burkholderia ambifaria MC40-6 chromosome 3, complete sequence2e-32149BLASTN svgBLASTP svg
NC_006349:2311817*2311817233999928183Burkholderia mallei ATCC 23344 chromosome 2, complete sequence08560BLASTN svgBLASTP svg
NC_008835:14832371483237150346620230Burkholderia mallei NCTC 10229 chromosome I, complete sequence08528BLASTN svgBLASTP svg
NC_009079:2339756*2339756236599926244Burkholderia mallei NCTC 10247 chromosome I, complete sequence08528BLASTN svgBLASTP svg
NC_008784:1151305*1151305117501923715Burkholderia mallei SAVP1 chromosome I, complete sequence012610BLASTN svgBLASTP svg
NC_010681:12345001234500126213227633Burkholderia phytofirmans PsJN chromosome 1, complete sequence9e-1693.7BLASTN svgBLASTP svg
NC_009078:3087759*3087759311399926241Burkholderia pseudomallei 1106a chromosome II, complete sequence012470BLASTN svgBLASTP svg
NC_007435:1825741*1825741184876423024Burkholderia pseudomallei 1710b chromosome II, complete sequence012280BLASTN svgBLASTP svg
NC_009075:3113393*3113393313999926607Burkholderia pseudomallei 668 chromosome II, complete sequence012410BLASTN svgBLASTP svg
NC_015947:22314932231493225840026908Burkholderia sp. JV3 chromosome, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_007650:29017512901751292799926249Burkholderia thailandensis E264 chromosome II, complete sequence04845BLASTN svgBLASTP svg
NC_009792:46589094658909468286123953Citrobacter koseri ATCC BAA-895, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_013716:44082014408201443527827078Citrobacter rodentium ICC168, complete genome2e-32149BLASTN svgBLASTP svg
NC_010407:31744703174470319754523076Clavibacter michiganensis subsp. sepedonicus chromosome, complete2e-0765.9BLASTN svgBLASTP svg
NC_013508:63914639148559921686Edwardsiella tarda EIB202, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_020063:974369743612048123046Enterobacteriaceae bacterium strain FGI 57, complete genome2e-23119BLASTN svgBLASTP svg
NC_004547:164000*16400019143427435Erwinia carotovora subsp. atroseptica SCRI1043, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008253:3896704*3896704392023823535Escherichia coli 536, complete genome8e-0763.9BLASTN svgBLASTP svg
CU928145:4167043*4167043419159624554Escherichia coli 55989 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_011748:4167043*4167043419159624554Escherichia coli 55989, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_008563:40835584083558410710723550Escherichia coli APEC O1, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_004431:4223232*4223232424609922868Escherichia coli CFT073, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_009801:4108179*4108179413170423526Escherichia coli E24377A, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_000913:3786124*3786124381459928476Escherichia coli K12, complete genome8e-0763.9BLASTN svgBLASTP svg
CP002516:88500*8850011436625867Escherichia coli KO11, complete genome8e-0763.9BLASTN svgBLASTP svg
AP010958:4668181*4668181469259924419Escherichia coli O103:H2 str. 12009 DNA, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_010473:3883701*3883701391159927899Escherichia coli str. K-12 substr. DH10B, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_007946:4050762*4050762407361822857Escherichia coli UTI89, complete genome8e-0763.9BLASTN svgBLASTP svg
CP002185:3998112*3998112402163723526Escherichia coli W, complete genome8e-0763.9BLASTN svgBLASTP svg
AC_000091:3827856*3827856385515527300Escherichia coli W3110 DNA, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_014973:54449544497854124093Geobacter sp. M18 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_021172:3786725*3786725381099924275Hyphomicrobium denitrificans 1NES1, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015717:4736500*4736500475899922500Hyphomicrobium sp. MC1, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_014923:5787493*5787493583009942607Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete2e-1385.7BLASTN svgBLASTP svg
NC_010505:55254615525461557227846818Methylobacterium radiotolerans JCM 2831, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_018681:56953435695343573584040498Nocardia brasiliensis ATCC 700358 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015580:32525343252534327642423891Novosphingobium sp. PP1Y, complete genome9e-1693.7BLASTN svgBLASTP svg
NC_008027:36775003677500369685019351Pseudomonas entomophila L48, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_007348:75269275269277745124760Ralstonia eutropha JMP134 chromosome 2, complete sequence5e-73283BLASTN svgBLASTP svg
NC_010682:46052346052349696636444Ralstonia pickettii 12J chromosome 1, complete sequence5e-0867.9BLASTN svgBLASTP svg
NC_011149:3822000*3822000384676224763Salmonella enterica subsp. enterica serovar Agona str. SL483,1e-0869.9BLASTN svgBLASTP svg
NC_006905:3845000*3845000386969524696Salmonella enterica subsp. enterica serovar Choleraesuis str3e-0661.9BLASTN svgBLASTP svg
NC_011080:3875320*3875320390054525226Salmonella enterica subsp. enterica serovar Newport str. SL254,3e-0661.9BLASTN svgBLASTP svg
NC_006511:3690828*3690828371609925272Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC3e-0661.9BLASTN svgBLASTP svg
NC_010102:38515003851500387645224953Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,3e-0661.9BLASTN svgBLASTP svg
NC_003198:3924952*3924952395155226601Salmonella enterica subsp. enterica serovar Typhi str. CT18,3e-0661.9BLASTN svgBLASTP svg
NC_004631:3910451*3910451393705126601Salmonella enterica subsp. enterica serovar Typhi Ty2, complete3e-0661.9BLASTN svgBLASTP svg
NC_008577:49074974907497493408326587Shewanella sp. ANA-3 chromosome 1, complete sequence5e-0867.9BLASTN svgBLASTP svg
NC_007384:3956465*3956465398127224808Shigella sonnei Ss046, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_014158:23373323373332771193979Tsukamurella paurometabola DSM 20162 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014931:4490526*4490526451036419839Variovorax paradoxus EPS chromosome, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_004460:16188921618892163876819877Vibrio vulnificus CMCP6 chromosome II, complete sequence8e-1073.8BLASTN svgBLASTP svg
NC_005140:34000034000036232922330Vibrio vulnificus YJ016 chromosome II, complete sequence8e-1073.8BLASTN svgBLASTP svg
NC_007508:50933655093365511609922735Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome2e-22115BLASTN svgBLASTP svg