Pre_GI: BLASTP Hits

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Query: NC_006347:625328:637012 Bacteroides fragilis YCH46, complete genome

Start: 637012, End: 637941, Length: 930

Host Lineage: Bacteroides fragilis; Bacteroides; Bacteroidaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This organism can become an opportunistic pathogen, infecting anywhere in the body and causing abcess formation. Enterotoxigenic Bacterioides fragilis (ETBF) is associated with diarrheal diseases. This strain was isolated from a patient with septicemia in Japan. Common gut bacterium. This group of microbes constitute the most abundant members of the intestinal microflora of mammals. Typically they are symbionts, but they can become opportunistic pathogens in the peritoneal (intra-abdominal) cavity. Breakdown of complex plant polysaccharides such as cellulose and hemicellulose and host-derived polysaccharides such as mucopolysaccharides is aided by the many enzymes these organisms produce. Although only a minor component of the human gut microflora, this organism is a major component of clinical specimens and is the most common anaerobe isolated.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016776:625628:640475640475641404930Bacteroides fragilis 638R, complete genomeputative anti-sigma factor0635
NC_009615:4031335:404787540478754048804930Parabacteroides distasonis ATCC 8503 chromosome, complete genomeanti-sigma factor3e-75281
NC_015164:2683162:268805026880502688976927Bacteroides salanitronis DSM 18170 chromosome, complete genomeanti-FecI sigma factor, FecR4e-67255
NC_015164:1812439:182494818249481825859912Bacteroides salanitronis DSM 18170 chromosome, complete genomeanti-FecI sigma factor, FecR6e-39161
NC_009614:29604:296042960430494891Bacteroides vulgatus ATCC 8482 chromosome, complete genomeanti-sigma factor5e-32138
NC_009615:2902871:290793229079322908915984Parabacteroides distasonis ATCC 8503 chromosome, complete genomeanti-sigma factor9e-32137
NC_013061:1236235:1260605126060512617591155Pedobacter heparinus DSM 2366, complete genomeFecR protein2e-31136
NC_009615:2902871:2917094291709429181521059Parabacteroides distasonis ATCC 8503 chromosome, complete genomeanti-sigma factor6e-31134
NC_016610:1805126:1820970182097018221481179Tannerella forsythia ATCC 43037 chromosome, complete genomesigma factor regulatory protein, FecR/PupR family1e-30134
NC_015160:585220:5886945886945897731080Odoribacter splanchnicus DSM 20712 chromosome, complete genomeanti-FecI sigma factor, FecR5e-28125
NC_013061:2077603:2092795209279520939521158Pedobacter heparinus DSM 2366, complete genomeFecR protein2e-27123
NC_015160:3180193:3195787319578731969471161Odoribacter splanchnicus DSM 20712 chromosome, complete genomeanti-FecI sigma factor, FecR4e-27122
NC_013061:1052957:1058539105853910597021164Pedobacter heparinus DSM 2366, complete genomeFecR protein7e-27121
NC_015160:4285542:4298357429835742994991143Odoribacter splanchnicus DSM 20712 chromosome, complete genomeanti-FecI sigma factor, FecR6e-27121
NC_014934:869715:8749888749888761511164Cellulophaga algicola DSM 14237 chromosome, complete genomeanti-feci sigma factor, fecr4e-26119
NC_004663:5194400:520130652013065202235930Bacteroides thetaiotaomicron VPI-5482, complete genomeputative anti-sigma factor8e-26117
NC_013132:153163:1710611710611722061146Chitinophaga pinensis DSM 2588, complete genomeanti-FecI sigma factor, FecR1e-25117
NC_015160:1055220:1075291107529110764691179Odoribacter splanchnicus DSM 20712 chromosome, complete genomeanti-FecI sigma factor, FecR2e-25116
NC_009615:2709040:2723565272356527246441080Parabacteroides distasonis ATCC 8503 chromosome, complete genomeanti-sigma factor2e-25116
NC_013132:35061:5502555025561551131Chitinophaga pinensis DSM 2588, complete genomeanti-FecI sigma factor, FecR4e-25115
NC_015160:3749636:3754954375495437560991146Odoribacter splanchnicus DSM 20712 chromosome, complete genomeanti-FecI sigma factor, FecR3e-25115
NC_015311:1157679:1173272117327211744891218Prevotella denticola F0289 chromosome, complete genomeFecR/PupR family sigma factor regulatory protein7e-25114
NC_004663:1983439:1988242198824219892491008Bacteroides thetaiotaomicron VPI-5482, complete genomeputative anti-sigma factor7e-25114
NC_013132:1165218:1166951116695111680991149Chitinophaga pinensis DSM 2588, complete genomeanti-FecI sigma factor, FecR1e-24114
NC_013132:3877500:3892955389295538941061152Chitinophaga pinensis DSM 2588, complete genomeanti-FecI sigma factor, FecR4e-24112
NC_015160:1734454:1749552174955217507301179Odoribacter splanchnicus DSM 20712 chromosome, complete genomeanti-FecI sigma factor, FecR6e-24111
NC_015277:2283530:2296154229615422973021149Sphingobacterium sp. 21 chromosome, complete genomeanti-FecI sigma factor, FecR3e-23109
NC_013132:3959258:3974681397468139758381158Chitinophaga pinensis DSM 2588, complete genomeanti-FecI sigma factor, FecR6e-23108
NC_013061:1948365:1964151196415119653771227Pedobacter heparinus DSM 2366, complete genomeFecR protein1e-22107
NC_015160:2239933:2256633225663322578081176Odoribacter splanchnicus DSM 20712 chromosome, complete genomeanti-FecI sigma factor, FecR1e-22107
NC_016609:5890292:5909702590970259109341233Niastella koreensis GR20-10 chromosome, complete genomeanti-FecI sigma factor FecR6e-22105
NC_015160:1786350:1805893180589318070381146Odoribacter splanchnicus DSM 20712 chromosome, complete genomeanti-FecI sigma factor, FecR2e-21103
NC_016609:2951301:2974250297425029754611212Niastella koreensis GR20-10 chromosome, complete genomeanti-FecI sigma factor FecR2e-21103
NC_009615:3756196:376181637618163762739924Parabacteroides distasonis ATCC 8503 chromosome, complete genomeanti-sigma factor4e-21102
NC_014933:364463:386293386293387267975Bacteroides helcogenes P 36-108 chromosome, complete genomeanti-FecI sigma factor, FecR3e-21102
NC_013061:2288134:229629622962962297117822Pedobacter heparinus DSM 2366, complete genomeFecR protein7e-21101
NC_015160:1961789:1979274197927419804191146Odoribacter splanchnicus DSM 20712 chromosome, complete genomeanti-FecI sigma factor, FecR1e-20100
NC_015277:5211779:5227944522794452291011158Sphingobacterium sp. 21 chromosome, complete genomeanti-FecI sigma factor, FecR1e-20100
NC_019904:3127945:3144013314401331450741062Echinicola vietnamensis DSM 17526 chromosome, complete genomeFe2+-dicitrate sensor, membrane protein3e-2099.4
NC_013061:3390399:3401073340107334021881116Pedobacter heparinus DSM 2366, complete genomeFecR protein7e-2098.2
NC_013132:5792000:5812434581243458137261293Chitinophaga pinensis DSM 2588, complete genomeanti-FecI sigma factor, FecR1e-1997.1
NC_016609:4233701:4238499423849942396711173Niastella koreensis GR20-10 chromosome, complete genomeanti-FecI sigma factor FecR3e-1995.9
NC_015966:1145974:1168398116839811694411044Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomeFecR anti-FecI sigma factor1e-1894
NC_015844:1188360:1205126120512612062891164Zobellia galactanivorans, complete genomeanti-sigma factor1e-1894
NC_013132:3877500:3894964389496438960881125Chitinophaga pinensis DSM 2588, complete genomeanti-FecI sigma factor, FecR3e-1892.8
NC_013132:2523780:2541780254178025429251146Chitinophaga pinensis DSM 2588, complete genomeanti-FecI sigma factor, FecR4e-1892.4
NC_009615:1469642:151552015155201516371852Parabacteroides distasonis ATCC 8503 chromosome, complete genomeanti-sigma factor5e-1892
NC_004663:3827521:3847435384743538484751041Bacteroides thetaiotaomicron VPI-5482, complete genomeputative anti-sigma factor8e-1891.3
NC_009614:868452:8750898750898760991011Bacteroides vulgatus ATCC 8482 chromosome, complete genomeanti-sigma factor8e-1891.3
NC_010995:2123909:2130175213017521311971023Cellvibrio japonicus Ueda107, complete genomeprobable transmembrane sensor9e-1891.3
NC_012560:2546000:254697025469702547803834Azotobacter vinelandii DJ, complete genomeAnti-sigma factor, FecR family1e-1790.9
NC_021150:2546000:254698225469822547815834Azotobacter vinelandii CA6, complete genomeAnti-sigma factor, FecR family1e-1790.9
NC_019960:1272956:131330313133031314100798Prevotella dentalis DSM 3688 chromosome 1, complete sequenceFe2+-dicitrate sensor, membrane component9e-1787.8
NC_015976:3118804:311880431188043119787984Sphingobium sp. SYK-6, complete genomeputative anti-sigma factor3e-1686.3
NC_016609:6136411:6155056615505661563091254Niastella koreensis GR20-10 chromosome, complete genomeanti-FecI sigma factor FecR2e-1583.2
NC_015593:2841856:288455028845502885536987Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeanti-FecI sigma factor FecR2e-1583.2
NC_016112:1735044:175536217553621756315954Methylomicrobium alcaliphilum chromosome, complete genomeAnti-FecI sigma factor, FecR3e-1582.8
NC_019904:2597722:2599345259934526003971053Echinicola vietnamensis DSM 17526 chromosome, complete genomeFe2+-dicitrate sensor, membrane protein3e-1582.8
NC_009937:5033152:503543550354355036382948Azorhizobium caulinodans ORS 571, complete genomeputative iron siderophore sensor protein8e-1581.3
NC_002516:1474000:147546414754641476306843Pseudomonas aeruginosa PAO1, complete genomeprobable transmembrane sensor3e-1479.3
NC_016609:1774259:1796030179603017972681239Niastella koreensis GR20-10 chromosome, complete genomeanti-FecI sigma factor FecR4e-1479
NC_014375:1146328:117307511730751174031957Brevundimonas subvibrioides ATCC 15264 chromosome, complete genomeanti-FecI sigma factor, FecR7e-1478.2
NC_014305:97055:99531995311005651035Erwinia billingiae Eb661 plasmid pEB170, complete sequenceAnti-FecI sigma factor2e-1376.6
NC_015844:3580591:3598600359860036001381539Zobellia galactanivorans, complete genomeanti-sigma factor4e-1375.9
NC_008027:4889662:489228348922834893212930Pseudomonas entomophila L48, complete genomeFecR-like transmembrane sensor7e-1375.1
NC_015497:4683741:470812247081224709078957Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomeanti-FecI sigma factor, FecR9e-1374.7
NC_015572:427732:455162455162456127966Methylomonas methanica MC09 chromosome, complete genomeanti-FecI sigma factor FecR7e-1374.7
NC_017192:1933106:193807519380751939040966Arcobacter sp. L, complete genomesigma factor regulator7e-1374.7
NC_014100:2782000:280326228032622804257996Caulobacter segnis ATCC 21756 chromosome, complete genomeanti-FecI sigma factor FecR1e-1274.3
NC_009614:1213500:124445212444521245405954Bacteroides vulgatus ATCC 8482 chromosome, complete genomeanti-sigma factor4e-1272
NC_004663:3801071:380184138018413802749909Bacteroides thetaiotaomicron VPI-5482, complete genomeputative anti-sigma factor5e-1272
NC_010338:2136193:2139478213947821405121035Caulobacter sp. K31, complete genomeanti-FecI sigma factor, FecR1e-1170.9
NC_014640:2693060:269635326963532697321969Achromobacter xylosoxidans A8 chromosome, complete genomeFecR family protein1e-1170.9
NC_011144:2710876:272531427253142726300987Phenylobacterium zucineum HLK1, complete genometranscriptional regulator1e-1170.5
NC_015976:2150676:2158706215870621597341029Sphingobium sp. SYK-6, complete genomeputative anti-sigma factor2e-1170.5
NC_014933:2195683:220746622074662208326861Bacteroides helcogenes P 36-108 chromosome, complete genomeanti-FecI sigma factor, FecR2e-1170.1
NC_013421:1954915:197058119705811971534954Pectobacterium wasabiae WPP163, complete genomeanti-FecI sigma factor, FecR2e-1169.7
NC_016609:4152977:4168767416876741697801014Niastella koreensis GR20-10 chromosome, complete genomeanti-FecI sigma factor FecR4e-1168.9
NC_020409:584000:5932265932265942901065Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeputative Anti-FecI sigma factor, FecR6e-1168.6
NC_015177:2642368:266130726613072662281975Pedobacter saltans DSM 12145 chromosome, complete genomeanti-FecI sigma factor, FecR8e-1168.2
NC_008686:1592073:161110316111031612077975Paracoccus denitrificans PD1222 chromosome 1, complete sequenceputative FecR3e-1066.2
NC_008027:2648560:265110926511092652029921Pseudomonas entomophila L48, complete genomeFecR-like transmembrane sensor3e-1065.9
NC_015594:1210736:121465212146521215626975Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completeanti-FecI sigma factor FecR4e-1065.9
NC_020054:2066510:2091801209180120929281128Fibrella aestuarina BUZ 2 drat genomeanti-FecI sigma factor, FecR6e-1065.1
NC_010943:1379707:138250813825081383476969Stenotrophomonas maltophilia K279a, complete genomeputative transmembrane protein7e-1064.7
NC_007974:934000:952517952517953503987Ralstonia metallidurans CH34 chromosome 2, complete sequenceputative FecR4e-0962.4
NC_018691:359695:359695359695360609915Alcanivorax dieselolei B5 chromosome, complete genomeAnti-FecI sigma factor, FecR4e-0962.4
NC_007947:1429165:1440674144067414417201047Methylobacillus flagellatus KT, complete genomeputative FecR5e-0962
NC_010510:339879:345373345373346371999Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeanti-FecI sigma factor, FecR5e-0962
NC_010322:768849:791778791778792734957Pseudomonas putida GB-1 chromosome, complete genomeanti-FecI sigma factor FecR2e-0860.1
NC_014664:1360524:137378513737851374765981Rhodomicrobium vannielii ATCC 17100 chromosome, complete genomeanti-FecI sigma factor, FecR3e-0859.7
NC_008687:133728:153212153212154198987Paracoccus denitrificans PD1222 chromosome 2, complete sequenceputative FecR3e-0859.7
NC_007677:241846:2447732447732458941122Salinibacter ruber DSM 13855, complete genomeputative anti-sigma factor3e-0859.3
NC_014032:269844:2737022737022748081107Salinibacter ruber M8 chromosome, complete genomeanti-sigma factor3e-0859.3
NC_005966:1780468:178461817846181785559942Acinetobacter sp. ADP1, complete genomemembrane bound regulator in multi-component regulatory system with cytoplasmic FecI (sigma factor) and FecA (outer membrane receptor)9e-0857.8
NC_018691:1293449:131480613148061315771966Alcanivorax dieselolei B5 chromosome, complete genomeAnti-FecI sigma factor FecR1e-0757.4
NC_014228:3591758:3599750359975036007931044Xenorhabdus nematophila ATCC 19061, complete genomeProtein fecR5e-0755.5
NC_004547:1174650:120816712081671209129963Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeiron(III) dicitrate sensor protein5e-0755.5
NC_016609:2150863:220153422015342202505972Niastella koreensis GR20-10 chromosome, complete genomeanti-FecI sigma factor FecR1e-0653.9
NC_014640:5047201:506272550627255063720996Achromobacter xylosoxidans A8 chromosome, complete genomeFecR family protein1e-0653.9
NC_015556:2265940:230352123035212304444924Pseudomonas fulva 12-X chromosome, complete genomeanti-FecI sigma factor, FecR2e-0653.5
NC_009850:972692:985853985853986821969Arcobacter butzleri RM4018, complete genomesigma factor regulatory protein, FecR/PupR family4e-0652.4
NC_017187:937649:950809950809951777969Arcobacter butzleri ED-1, complete genomesigma factor regulator5e-0652
NC_007953:1088933:108798010879801088936957Burkholderia xenovorans LB400 chromosome 3, complete sequencePutative FecR6e-0652